Echinococcus granulosus (hydatid tapeworm): EGR_01578
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Entry
EGR_01578 CDS
T05553
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013
Nucleocytoplasmic transport
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_01578
09122 Translation
03013 Nucleocytoplasmic transport
EGR_01578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_01578
03041 Spliceosome [BR:
egl03041
]
EGR_01578
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
EGR_01578
Spliceosome [BR:
egl03041
]
Complex C
Other components
EJC/TREX
EGR_01578
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EGR_01578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
36337293
NCBI-ProteinID:
XP_024354692
UniProt:
W6US79
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MNTLSLLSTGSKFVSSCLKEWSRFGRANFIQQSKDDVDVCTQNLCDLFIKIISGEGRVDI
LNKLISELAKVFNDDDFSSKLADILWLLDVAMTDANDAQARDRFFQILSVCKGSTDSALL
MERLSDETLEQISLISSHMQTRTRYVRIKTRLFYKQQKFNLLREESEGYAKLIVDLSNTP
MGSAEVCITHVRSLIGYFDLDPNRVLDIILDVFEIRRDAFSLFIELLTLYQPDKADLTHI
LGHKFHFYQEREGTTPESLHRLAALLISSGLVDVDILFAHLQPPDATIHSGRLKSIRDAK
SWRPVMHPTGSAIHGSLDNFIATGGLAPTVSGTGTGGSGSLLGDPSRPLGSGNDTDHWNG
LNGGGSRRGGGALDTSDDSDDKKDAWLPENDVEIEDSAEFQFVNNQKLDLCTALANSGDW
KAAQKVIDRFPGHWVGSYAPLNKAICNLVHFLIDQLYESKSTLPPSMLKRRKKPTPPELF
LNQEDAKRLTIQQATTFGNLGRYILPIVGYLGPFVSSDVTLIVKLCRVCSVYVSDLMSKK
AQPDAVYQAIFNMLDEAILPALNMVSANCCLAEEIWKLIRHLPYEHRLVYRLYGQWKHMS
SQGEPALLRKRTTILIRTKALMKRLSKENVKQLGRHLGKLSHSNPGLLFDFMLHNIQMFT
NLITPVVDSLKYVSSLGYDVLAFCLIEALASDKNKTDSLEMGSNLHGQFSFVTHKIFIAL
ATFTGALCKKYQFDLAGILQYVLNQLKAGRSEDLLILQEIIHQMAGLDPYEEMTNEQLEA
ASGGEILLQEGGYYAQIRNARRNANRLKEALIENKVIMPLVFLMAQQRDAILYLDDPERH
VKTAGRLYDQCQGTLVQFITFLSLQLSREEMQAQCFSIDQMMSEYSVPADTAFCLFRNLF
LQKVAHLFEASIEKSGDDDKSVPANNKAAYVKAARTVIVDVAHSIEPLYPPRVWEELGTA
FFATFWCLESGDLVFPSAAYQRQRHILRSQLDAIEQNSDLNSDKKRREKERCQTLMNRLS
KEQDARRVHVDRIRAWLLSERDTWFQTMSATKTDTITQFLQFCVYPRVFYTASDAVYAAQ
FIHVLHQLKAAQFSTLICLDRIFNDITLPVSICTEKEAHRYGRFLCRVFEFVMRWHSSEE
IFNQECGQYPGFVTVFRKGTNANTKADQLQFENYRHVVHKWHYRVTKAAVACLESGNYAQ
IRNALIVLTRILPHYPKIGQFGSAVERRVNKLKEEEKDRRPDLKASFSYFPSCTKNYAGV
LRPLKANWVSEEEFHEVEQKPPTKTQLSSQHIQSSTLSQGSNPALAITEASVIAPPTTTA
VVSTSTAPTSTRVSPPVDSTRTHTVSSSEGVVKPVVATTNSKSTRNPSVSSQKRVASNAS
CEGGNSSSIEHVSGDDLCDTKHRRNPSERSYGVSSSKRPRVSDPQQQQQQMKEDSPTLVS
SKEIRRLQRKRAAAAVLLGNPAGNVAPSDVDGRGNKDSVAYLDLDDTHTSSAAPSSKKSR
KGGPPRLPVSMEKQRMEEEGVDHRHRRSPASGSHRRHRSTRRASGGGSPSTPPTAAQLRH
TRK
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattatctctcctgagtactggttctaagtttgtttcctcttgcctgaaagaa
tggtctagatttgggcgtgcaaacttcattcaacagtcaaaagatgacgtggacgtttgc
actcagaatctatgtgatttatttatcaagattattagtggtgaggggagagtagacatt
ctaaacaagttgatatctgaattagcaaaggtatttaacgacgatgacttttcatcgaaa
ttggcagacattttgtggcttctggatgttgcaatgaccgatgcaaatgatgctcaagca
agagatcgtttcttccaaatcctctctgtgtgcaagggttcaacggattctgcgctttta
atggaacgactttccgatgaaacacttgaacaaatatccttgattagttcacatatgcaa
actcgaactcgttatgtgcgcataaagactagactcttttacaaacagcagaagttcaat
cttcttcgggaggagagtgaaggctatgctaagctgattgttgatttaagtaacaccccc
atgggttcggcggaagtttgtattactcatgttcggtctctcatcggctattttgatctt
gatcccaaccgcgtgctcgatatcattttggatgtctttgaaattcgtcgagacgcattt
tctctcttcatcgaattgctcactttgtatcagcccgataaagctgacttaactcatatt
ttgggtcacaaatttcacttctatcaggaaagggaaggtaccacaccggagtctctacac
cgtcttgctgcactcctcatttcctccggtttggttgatgttgatattctttttgctcat
ttgcagcccccagacgcgactattcactcaggtcgtctgaagagtattcgtgatgcaaaa
tcttggagaccggtcatgcacccgactggttccgccatacacggcagtttggacaatttt
atagcgaccggtggcctagccccgacagttagtggtaccggcactggtggttcaggaagt
ctgctaggcgatcccagtcgaccgcttggtagtgggaatgacacagatcactggaatggt
ctcaatggtggaggcagcaggcgaggaggtggtgctttagacacaagcgacgactccgac
gacaagaaagatgcctggttacctgaaaatgacgtggaaatcgaagattctgcagagttt
cagtttgttaacaatcagaaattagacctctgcacagctttggctaattctggcgattgg
aaggccgctcaaaaagtcatcgatagatttcctggtcactgggtcggttcctatgctcca
ctcaacaaggctatctgcaatctggttcatttcctgatagatcaactttacgaaagcaaa
tcgactttgcctccatcgatgctgaagagacggaagaaaccaacaccaccagagttgttc
ttgaaccaggaagatgccaaaaggttaaccatacaacaagcaaccacctttggcaacctg
ggacgttatattttaccgattgttggctaccttggtcccttcgtttccagtgacgtaacg
cttatcgttaagctttgtcgtgtttgttccgtctatgtatctgatttgatgagtaaaaag
gctcaaccagatgcagtttaccaggcaatattcaacatgctggacgaggcgattttgccc
gctttaaatatggtgtctgcgaattgttgtcttgctgaggagatatggaagcttattcgt
catttgccttatgaacacaggctggtatatcggctttacggtcaatggaagcacatgagt
agccaaggtgagccggcgcttctacggaaacgcaccactattctcattcgaacaaaggca
ctaatgaagcgcctgagcaaagagaatgtcaagcaactggggcgtcatcttggtaaacta
tctcatagcaatcccggtctgctgttcgattttatgctacataatatacaaatgtttact
aatctcattaccccggtcgttgattcgttgaagtatgtgagcagtctcggttatgatgtc
cttgcattctgtcttatcgaagcactggcgtcggacaaaaataagacggattcattggaa
atgggaagcaatttgcatggtcagttttcttttgtcactcataagatttttatagccctt
gctacctttaccggagcgctgtgtaagaaatatcaatttgacttggcgggtatcctccaa
tacgttttgaatcaacttaaagctgggagaagtgaggatctactcatcctacaggagata
atccaccagatggcgggtttagatccatacgaagagatgaccaacgagcagctagaggcg
gcctcgggtggggagattcttctccaggagggaggctactacgcccaaattcgaaacgca
cgtcgcaacgctaatcgcttgaaggaagctcttatcgagaataaggtcattatgccactc
gtctttctaatggcgcaacagagggatgccattctctacctagatgatccagaacgacac
gtgaaaaccgctggacgtctctacgatcagtgtcaaggaacgttggttcaattcatcacc
ttccttagtcttcaactctcgcgagaagagatgcaggcacaatgtttttctattgatcaa
atgatgagcgagtactctgtccctgcggatacagccttctgcctcttccgaaacctcttt
ctccaaaaagttgcacatttgtttgaagcgtcaattgagaagtccggtgacgacgacaaa
agtgtaccagcaaataataaggctgcttatgtgaaggcagcacgcaccgtcatagtcgac
gtggctcactctattgagccactttacccgccacgagtttgggaggaactgggtacggcg
ttctttgccaccttttggtgtctcgagtcgggcgatctcgttttccccagcgccgcctac
cagcggcaacgccacatcttacgcagccaactcgatgcgatcgagcagaactccgacttg
aattcagataagaagcgtcgtgagaaggagcgctgtcagacgctgatgaatcgtctgtcg
aaggagcaggacgcgcgtagggtgcatgttgaccgcattcgcgcttggttgctgtcggaa
cgagacacctggttccaaacgatgtcggccaccaagacagacacaataactcagttttta
caattctgtgtctatccacgtgtattctacactgccagcgatgctgtctatgctgcccag
ttcatccacgtgctccaccagctgaaagctgcgcaattctccaccttgatttgtctcgac
aggattttcaacgatataacgttgccagtaagcatatgcacggagaaggaggcgcatcgc
tacggtcgatttctctgcagggttttcgaatttgttatgcgatggcactcctcggaggag
atcttcaatcaagaatgtggccagtatcccggctttgtaactgtttttcgcaaaggcacg
aatgcaaacacaaaggcggaccaattgcaattcgagaactaccggcatgtagtgcacaag
tggcactacagagtgaccaaggcggcagttgcgtgtcttgagtcgggtaactacgcacaa
atccgcaatgccctcattgtgctcacgcgcatcttgccgcactacccgaaaattggccaa
ttcggcagcgccgtagaacggagggtcaacaaactcaaggaggaggagaaggataggcga
ccggatctaaaggcaagcttttcttacttcccctcatgtacaaaaaactacgcgggtgtg
ttacgtccattgaaggccaattgggtctcggaagaggagtttcacgaggtggagcagaag
cctcctacgaagacccagttgtcctcccaacacatccagtcgtcaaccttgtcgcagggc
agtaaccctgccttagcaataacagaggcatctgtcatcgccccacctactacgacagct
gtggtcagcacaagcaccgcccctaccagcactcgcgtctctcctcccgtcgactccacg
cgcacccacactgtctcgtcatccgaaggagtcgtgaagccagttgttgcaacaactaat
agcaagtctaccaggaacccgagtgtctcatctcaaaagcgtgttgcatccaacgcatcc
tgtgagggcggaaactccagctcaatagaacacgtttccggtgatgatctttgtgacaca
aaacaccgccgcaacccatctgagaggagctatggcgtgtcttcttcaaaacgccctcgc
gtgtcagatccacagcagcagcaacaacaaatgaaagaagattcgccaactctagtctcc
tcaaaagagatacgtcgccttcagcggaagcgagcagccgccgcagtcctcctcggtaac
ccagcaggcaacgtcgctcccagcgacgttgatggccgcggaaataaggacagcgtcgct
tatttggatctcgacgacacgcatactagcagcgctgcgccatcgtcgaaaaagtccaga
aagggcggaccccctcgcctcccggtgtcgatggagaagcaacggatggaggaggaagga
gtagaccaccggcaccggcgttcccctgcatcaggcagccaccgacgccatagatccact
cgtcgggcctctgggggtggctcaccctctacaccacctacggctgcacagctgcgtcac
acgcggaagtaa
DBGET
integrated database retrieval system
