Echinococcus granulosus (hydatid tapeworm): EGR_01811
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Entry
EGR_01811 CDS
T05553
Name
(RefSeq) putative ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGR_01811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_01811
03012 Translation factors [BR:
egl03012
]
EGR_01811
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EGR_01811
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
EGR_01811
Translation factors [BR:
egl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
EGR_01811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
HA2_C
Helicase_C
nSTAND3
NB-ARC
OB_NTP_bind
AAA_22
HA2_N
AAA_19
AAA_16
ATPase
Myosin_head
PhoH
T2SSE
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
36337526
NCBI-ProteinID:
XP_024354516
UniProt:
W6UNS4
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MNTKPTEFTLDQRIIERIAGVVKDVERLGDCLISRKRALPSESSEMKSPHLSLTSTKEEF
SKVVEMVDEHAFGGTRINVGAENEKTPCSIELQRNEALDKSLRLEMIQKVQATKYVLMNS
KRKNLPTFAQKQDFLKMSDENQVVVISGETGCGKTTQLPQYLLEHAVLRGYGSCTRIVVT
QPRRISAISVAERVATERGQCLGEDIGYQIRLESVLPKRPQSSILFCTTGIVLQWFQSDP
LLKSVSHVVVDEVHEREMLGDFLITMLKRILPLRPDLHVILMSATLNSEEFAQFFDGCPR
LEIPGRTFAVDTLYLEDVLHRTGFEMPQDALYRFSKANRRMSQMRADSVGNPPITPGIRQ
GYKQWLKESTSRLSLGSRQFLEAMDLYSCPPPELVAAVIDYIIRTTSSGAILAFVPGLGD
ILDTMKALRSIDPALYAETRGGVMLHALHSRLPSARQRVVFEPPPAGKRKVVIATNIAET
RAMKCNGSNGTMFYIPMAFSFSITIEDIVYVVDSGQIKITTYDPRTNTSTLARVLVSKAN
AAQRRGRAGRVRPGQCFHLFSRFTHDRVMLDFLPPEITRIRLEDAILRIKALELGPVTSF
LSSCMDPPDLETISRTLQFLRDIQALKPLVPLCNDSVPTAQLSRMSKRQRTRILEGAIEA
ATSGSPVAEDNDVLTPLGHHLANLPLDPQCAKLLLLGAFFCCLKPALAVSACLAFKEPFE
VPLGSEALADACRIKLTEGSQSDHWAFYVALSEYLGLREHEKYGYCRKNFLNRRTMDDLC
HLMREFVDLLYERKYIKSRDMDEVEANRYSHDVRIFRAILAGAFYPNLIMATARRTNPGR
APPTPFITTPLMDEKVTLHNKSVNALVRPQNRLWLTYFQKMKLDHDAAPTVFDSTLINAR
PVVFFSSKISHSQAVNGGTLVVDDWIKFKSGPRVPQLVESLKRCMERWLNEKVRYPGPTN
WDASNMEGRILQTIVDYFINEAPPAFELGTNHNSKHRGFAHQQGQRPVTANQSQQ
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaagccgactgaatttaccctcgatcaaaggattatcgaacgaatagctgga
gttgtcaaggatgtggaacgcttaggtgattgtcttatcagccgcaaacgggcattacca
agtgagagtagtgagatgaagtcccctcatctgagccttacatccaccaaagaggaattc
tccaaagtcgtggagatggtggatgagcatgccttcgggggtacgcgaatcaatgttggg
gcggaaaacgagaaaaccccatgttcgatagaactgcagaggaatgaggctttggacaaa
tcacttcggttggaaatgattcagaaagtccaagcgacgaaatacgtgttgatgaattcg
aaacggaagaatttgccgacttttgcgcaaaaacaggatttcctcaaaatgtcggacgaa
aatcaggtggtagtgataagcggtgagactggttgcggcaagacgacgcagttgcctcag
tacctgttggaacacgcggtactacggggttacggctcctgcacccgtattgtggttacc
caaccgcggcgcatttcggctatctccgtggccgagcgggtggcaacggagcggggtcag
tgcctgggcgaagacatcgggtatcagattcgtctggagtccgttttacccaagcggccg
caaagttccatcctcttctgcactaccgggatagtcctgcagtggttccaatccgaccct
ctccttaagtcggttagccatgtagttgtggacgaggtgcacgagcgagaaatgcttggc
gattttcttataaccatgctcaaacgcattctccccttgcggcctgaccttcacgtcatt
ctcatgtcggcaacccttaattcggaagaattcgctcaatttttcgacggttgcccgaga
ctggagattcctggtagaacgttcgcagtagacacgttatatcttgaggacgtactccat
cgcactggctttgaaatgccgcaggatgcgctgtataggttcagcaaagccaatcgacgt
atgtcccaaatgcgtgctgattctgtcggcaacccgcccattaccccaggaatccggcag
ggctacaaacagtggttaaaagaatccacctctagactctcgctaggcagtcgtcaattc
ctcgaggctatggacctttactcatgcccaccacctgagctggtggctgcagtcatcgac
tacatcatccgaaccacctcctccggggccattctcgccttcgtgcctggtctcggtgac
attttggatacgatgaaggcgttgcgcagcattgacccagcgctgtacgcggagacgcgg
ggcggagtgatgctgcacgcactccactcccgcctcccctccgctcgccagcgcgtcgtt
tttgagcctccccccgccggcaagcgcaaggtcgtcatcgccactaacatcgccgagact
agagctatgaaatgcaatggttcaaatggcactatgttctacatacctatggcgttctct
ttcagtatcacaatcgaggatatagtgtacgtggtggacagtggacagataaagatcact
acttacgatccgcgcaccaacacatccacacttgcgcgtgtcctcgtgagtaaagccaat
gcagcccagaggcgtggtcgggctggtcgagttcgtcccggacaatgcttccacttgttc
tccagatttactcacgatcgggtcatgctagacttcctcccgcctgaaattacacgcatc
cgtctggaagatgctatcctccggatcaaggctctggaactaggtccagtgacaagtttc
ctctccagctgtatggatccgcccgacctcgagacgattagtcgtaccctgcagttcctt
cgcgatatacaagcgcttaaacccttggtccctttgtgcaatgattccgtgcccacggct
caattatcgcgcatgtcgaagcgacagcgcactcgcatattggagggcgccattgaggct
gcaacgtcaggatcaccagtggcggaagacaacgacgtgctcacaccactgggccatcat
ttggccaacctgccgttggacccacaatgtgctaaactgctcctcctcggcgcattcttc
tgttgtctcaagcccgccctcgccgtctccgcctgtctcgccttcaaggagccctttgag
gtacccctcggctccgaggctcttgccgacgcatgtcgcatcaagctcactgaaggctcc
cagagcgaccactgggctttctacgttgccctatcggagtacttgggattgcgtgaacat
gagaaatatggttattgtcggaagaatttcctaaatcgacgaacaatggatgacctgtgt
catttgatgcgtgagtttgtggatctattgtacgaacgaaagtacatcaaatccagagac
atggacgaggtggaggcgaatcgctactctcacgacgtccgaatattccgcgccatcctt
gcaggcgcattctaccccaatttaatcatggccactgctcggagaacaaaccctggtaga
gcaccacctacgccgttcatcaccactcccttgatggacgagaaggtgactctgcacaac
aagtcggtcaatgcgctcgtccgaccgcagaaccgcctctggctcacctactttcagaaa
atgaaacttgatcacgacgcagcgcccacggtattcgactcaactttgatcaatgcacgc
ccggtggtcttcttttcctcaaaaatttcccattcccaggcggttaatggtggaaccctc
gtggtggacgactggataaaatttaagtcaggtcctcgcgtgccgcaactcgtagagagt
ttgaagcgttgtatggagaggtggctcaacgagaaggtacgctacccaggcccgactaac
tgggacgcctccaacatggaaggtcgtattcttcagactattgttgactacttcattaac
gaggcaccgcctgcttttgagctgggcaccaaccacaattcgaagcatcgaggattcgca
caccaacagggccagcgtcccgtaaccgccaaccagtcgcagcagtga
DBGET
integrated database retrieval system
