Echinococcus granulosus (hydatid tapeworm): EGR_01892
Help
Entry
EGR_01892 CDS
T05553
Name
(RefSeq) Pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_01892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_01892
03041 Spliceosome [BR:
egl03041
]
EGR_01892
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EGR_01892
Spliceosome [BR:
egl03041
]
Complex B
Other components
Prp19-related factors
EGR_01892
Complex C
EGR_01892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_2
ARM_TT21
NRDE-2
TPR_21
SNAP
LTN1_E3_ligase_6th
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
36337607
NCBI-ProteinID:
XP_024354597
UniProt:
U6J813
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MADLFSIAEENLPFEENLIKNPYNVKAWLRYVQFQKSGSPHILYLTYERALKQLPGSYKL
WYNYLKLRRQHSRRMCPGSLIYEETNNAHERALVTMHKMPRIWTDYLQFLMFQGYITLTR
RTFDRALKALPITQHERIWRIYLRFADKHGADVNESCARIYRRYVKFAPDDIERFINFLM
RNGNVNEAAILLAKAINEENFISREGKSKFQLWQVLCDLLVKNPTKVTSLDADAIIRQGI
SRYTDQVGILWTSLADFYIRSGNLSRARDVYAEAISTVITVRDFSQTFDAYAEFEQSITK
AHMEALEKRSNVTETDEMEVELCLARLESLMERRPLLLNSVLLRQNPHNVNDWLQRVELL
EPQGPRKQIEAFMEGISSVDPAKATAGRPSTLWIELARLYEKHNQLSDARMVLQKATGVG
FIHVEDLASIWCEWAEMEIRHGEVETALQLLARAVTPVASHKVDYYDRSEPVQNRLHKSI
RLWTLYTDLEESFGTFQTTKAAYDRMIDYRIATPQIIMNYGLFLEEHNYFEEAFKAYEKG
VAIFRWPNVFDIWATYLTNFMERYGGSKLERARDLFEQCLEKCPSEFAKQLYLLYAKLEE
DHGLARRAIKIYERATEAVEPEERFTMFNIYIQRIADLHGVTHTRAAYEQAIERLPEKHA
RQMCLRFADLERKLGEVDRARAVYAYAAQMCDPRTEPEFWKIWKEFELAHGNEDTLREML
RIKRSVQATYNTKVSFMASHLAATKERAENPMQAVESAITTEETSVAKRPLIVFKSAGVV
SQVGSEDGSGGGVMSGTALSNPEAIDIDLPVDNEDEDSEGMEAEGEEARILEDREDGSKS
RLRIEKQPVPSAVFGSLKDDNDD
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcttcagcattgctgaagaaaatttgccatttgaggagaatctgataaag
aacccttacaatgttaaggcctggctcagatatgttcaatttcagaaatcaggctctccc
cacattttgtatttgacctatgaaagagccttaaaacagttacctggaagttataaattg
tggtacaattacttgaaactccgacgtcaacactctagaagaatgtgtcctggtagttta
atttatgaagaaacgaataatgcacatgagcgcgctcttgtaacaatgcacaagatgcct
cgtatttggacggattatcttcaatttctaatgtttcaaggttatataacgctgacacgt
cgtacgtttgatcgagccttgaaagccttgccaattacacaacatgaacggatatggcgt
atttatctcagatttgctgacaagcatggcgcggatgtaaatgaatcatgtgctcgcatc
tatcgccgttacgttaagtttgcccctgatgatattgaacgatttatcaactttctaatg
cgcaacgggaatgttaatgaggctgccattctcttagcgaaggcaattaatgaggagaat
ttcattagtcgtgagggcaaatcaaaattccagttgtggcaggtgttgtgtgaccttctc
gtaaaaaacccaacaaaagtaacctctcttgatgcagatgctattattcggcaaggaata
agtcgctacacagaccaggtgggaatactgtggacttctttggccgacttttacatccga
agcggaaatctttcgcgagctagggatgtttacgctgaagctatttccactgtcattacg
gtccgtgatttcagtcagacattcgacgcatacgcggagttcgaacaatctatcaccaaa
gcccatatggaggccctggaaaagcgttcgaatgtaactgaaactgacgaaatggaagta
gagctatgcctggccagattggagtcgctgatggaacgccgacctctcctactaaatagc
gttcttctcagacaaaatccgcataacgtaaacgactggctgcagcgagttgaactactc
gaaccacagggtccacgaaagcagattgaagcgtttatggagggtatcagctcagtagat
ccggccaaagcaacagctggtcgaccatcaactttgtggatagaactggcacgtctctac
gaaaagcataatcagttgtcggacgccaggatggttctgcagaaagcaactggggtcggt
tttatccatgttgaggacttggcctccatttggtgtgaatgggctgaaatggaaattcgt
catggtgaagtcgaaaccgctcttcaactgctcgcgcgagctgtaactccggtggcttca
cacaaggttgactactacgatcgctcagaaccggttcaaaatcgccttcacaagtctata
cggctttggaccttgtacaccgacctagaggagagtttcggtaccttccaaaccacaaag
gctgcttacgaccgtatgatcgattatcggatcgctacgccacaaattataatgaactat
ggtcttttcctggaagagcacaactactttgaagaggccttcaaggcctacgaaaaggga
gtcgccatcttccgatggccaaacgtttttgatatttgggcgacgtatctcacaaacttc
atggagcgctatggagggagcaaattagaacgtgctcgagatctatttgaacaatgcctt
gaaaaatgtccttctgagtttgctaagcaattatacctcttgtacgcaaaacttgaagaa
gatcatggtctggctcgacgcgcaatcaagatttatgagcgtgcaaccgaagcagttgaa
ccggaggagcgattcactatgttcaatatctacatccagcgcatcgcagatcttcacggc
gtaacccatacacgggcagcctacgagcaagccatcgaaaggctaccagagaagcacgct
cgccaaatgtgcctccgtttcgctgatttggagaggaaattgggtgaagttgaccgcgca
cgtgctgtttacgcttatgctgctcaaatgtgtgatccccgaacagagccggaattttgg
aaaatttggaaggaatttgagctagctcatggaaatgaggatacactgcgcgaaatgctt
cgtatcaagcgcagtgtgcaggctacttataacacaaaagtaagcttcatggcaagtcat
ctagctgctacaaaagagcgggccgagaacccaatgcaagcagtcgagtcggccatcaca
acagaggagacctctgtagccaaacgaccactaattgtttttaaatcagctggcgttgtc
agtcaggtaggctccgaagatggtagcggtggtggagttatgagtggaactgcccttagc
aatccagaggccattgacattgatttaccagtggacaatgaagatgaggatagcgaagga
atggaggcagagggagaagaggcgagaatactcgaagaccgggaagacggctcaaagtct
cgtcttcggatcgaaaagcagccggttccttctgctgtctttggaagtcttaaggacgat
aatgatgactaa
DBGET
integrated database retrieval system
