Echinococcus granulosus (hydatid tapeworm): EGR_02388
Help
Entry
EGR_02388 CDS
T05553
Name
(RefSeq) General transcription factor IIH subunit
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03022
Basal transcription factors
egl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EGR_02388
09124 Replication and repair
03420 Nucleotide excision repair
EGR_02388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_02388
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_02388
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EGR_02388
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EGR_02388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
PH_SLA1
BBL5
Motif
Other DBs
NCBI-GeneID:
36338103
NCBI-ProteinID:
XP_024353788
UniProt:
W6UVY7
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSKKSEDVLLMVKHVRHKKVDGTLYVNSGRIAWRNQTSDSFRISAAFEDIRLQRVSLDNK
EKVQLQLLMHSGESFTFHFADTAGREKQLEMRNKVKEMLQLMLPKFKDKAHSELNEKFRI
LESNPHLLSLYKELVVTGILSSEEFWARPEFSQSKSWVSRSGISLNLTQERTQIAGVPSC
LLSDIKPEMDGTNSIKYNLTKEIIDAIFRAYPAVRQRHRDLVPDKLSEADFWNKFFQSHY
YHRDRGIINQDDVFSECDGLDEKILRQELLRCRKMRLASHLDVGDLEDHSIGEGYGVEPP
SPPPISTSNTKQKVNTNQLLLHRFNKHSILIMRALAKYSAGAASTAATNESAYRDLAASG
NLKSDVQLAIADVSAGGCLMAGGKSATGEKSGAPSSVLLLLSSEQSKELSMLYSAAGELL
RHFWVCLPTTTVAMAEKIIRIYESLGRFEATKLTPFIESVESTLSNAGVRGNGGNGNGIY
RCRVTAHLESLINAAKDKFNEWHAGQKRLNSSQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaagagtgaggatgttttgctaatggttaagcatgttcgtcacaagaaggtc
gatggaaccttatatgttaactctggaagaatagcttggagaaatcaaacctctgattcg
tttcggatcagcgcagctttcgaggatattcgactgcagcgtgtcagtttagacaataag
gaaaaggttcagctccaactgttaatgcacagtggtgaatcatttacttttcactttgct
gacactgctggtcgcgaaaagcagctggagatgcgcaacaaagtaaaagaaatgctgcag
cttatgctgccgaagtttaaggataaggcccactccgagttgaacgaaaaatttcgcatt
ttggagtcaaatccccatctactgtctctttataaggaactagtagttactggtatattg
agttctgaagaattttgggctcgaccggaattttcccaatcgaagtcttgggtgtcacgt
tcgggtatatcactcaatttaactcaagagcgtacccagattgctggagttcccagctgt
ttactgagtgacatcaagcccgaaatggatggtacaaacagcatcaagtataatctcact
aaagagataattgacgcaatctttcgggcctatcctgccgttcggcagcgacatcgagac
cttgttcctgataaactctctgaggcggacttttggaataagttctttcaatcacactac
taccatcgggatcggggaattatcaatcaagatgatgtgttcagtgagtgcgatggatta
gatgaaaaaatcctgcgacaggagttgctcaggtgcagaaaaatgcgcttggcaagtcac
ctagatgttggcgatttagaagatcactcgataggtgaaggctatggtgttgagcctccc
tctcctcctcccatttctacctccaatacaaaacaaaaagtgaacacaaatcaactcctg
cttcatcgctttaacaagcactcaattctgattatgcgagctcttgccaagtactccgct
ggagcagcctctaccgctgctaccaatgaatccgcctatagggaccttgcggcgtctggc
aacctcaaaagtgacgtccagctggccatcgcagacgtctcagccggtggctgtctcatg
gctggtggaaagtcggcgactggtgagaagtctggtgcgccctcctccgtgctgcttctg
ctttcctcggagcaatcgaaggagctgagtatgctttactcggctgcgggtgaactcctg
cgtcatttttgggtctgccttcccacgaccactgttgcgatggcggagaaaataattcgc
atttacgagagtttaggtcgctttgaggcgacaaaattgacgccctttattgagtcggtt
gagtcgacactttccaatgctggtgtccgaggcaatggaggtaacggaaatggtatctac
cggtgtcgcgtcaccgcgcatttggaatcacttattaatgctgccaaagacaaattcaac
gagtggcatgcaggccaaaaaaggctaaacagtagtcaataa
DBGET
integrated database retrieval system
