Echinococcus granulosus (hydatid tapeworm): EGR_02847
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Entry
EGR_02847 CDS
T05553
Name
(RefSeq) Splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_02847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_02847
03041 Spliceosome [BR:
egl03041
]
EGR_02847
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_02847
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EGR_02847
Spliceosome [BR:
egl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
EGR_02847
Complex B
EGR_02847
Complex C
U2 SnRNP specific factors
EGR_02847
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
EGR_02847
TFTC complex
EGR_02847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
36338562
NCBI-ProteinID:
XP_024353590
UniProt:
U6J7Y4
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MFLYNLSLQKASGIIHAINGSFSGTKQQEIVVAKGKILEIMRVDASSGKLYTLLTTEVFG
IIRSLMPFRLTGGTKDYIVIGSDSGRIVVLEYIPSKNIFEKVQQETYGKSGCRRIIPGQY
LAIDPKGRALMVGAVEKQKLVYVMNRDSQARLTISSPLEAHKSNTLVYHMVGVDVGFENP
TFACIEMDYEEADQDATGEAARSAHQLLTYYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNEVHSGILICSENYITYKNFGDEPDIRCPIPQRRNDLDDPDRGLLFVCSATHRTKNLFF
FLAQTEQGDVFKINLEKDKETVTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGNHHLYQ
IAHLGDNDDEPEFSSAMPLEEGDTFYFSPRPLKNLIEVDTIESLSPITGLHIADLANEDT
PQMAVLCGRGPRSTFRLLRHGLEVTEMAKSDLPGSPNAVWTVKRNSEEEYDSFIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHIRADKRINVWRTPG
KKTIQRCAVNRRQVVIALTGGELVYFEMDATGQLNEYTERKEMPADVICMALGRIPPNEQ
RSRFLAVGLADNTVRILSLDPSDCLSPLTMQGLPTAAESLCIVEMGANESENTAGGGILY
LNIGLNNGVLFRVVLDPVTGELSDTRTRYLGTSPVKLFRVAMQGGDAVLAVSSRSWLSYM
YQSRFHIIPLSYEALEFASGFSSEQCPEGIVAICENSLRILALEKLGAVFNQTSTLLQYT
PRRFVFHPESNNTFIIETDHNAFTDEVKEERRREMSERILASLGDVREREKAAGFLSRSL
PEDVFGAPKAGPGMWASLLRLMNPLSGETLQICRFAQNEAAHAITLATFTNRPGDYYVIV
ALSKELVLNPRSCSGGFLRTYRTTPTGDFLEFVHDTSVEDYPAALCAYQGRLLAGIGHRL
RLYDMGKKKLLKKGENRHFPNLINGIYGIGHRILVTDVQESLFWVRYRPRADNQMVIFAD
DASPRWITQLAVLDNSTAAVADKFGNIIILRLPPDVNDNVEEDPSGNRSLWDRNALGGAS
QKLEMVCHFYVGEVVTSLQKATLIPGGSEGLVYATLSGSLGILIPFASKDAYSFFQHLEL
HMRSENISLVGRDHLHYRSLYYPCKNVIDGDLCEMFNTLDADKQRNIAEEMDKVPTDIAK
RLEDMRTRCAF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtacaacttgagtctgcagaaggcatctggtattatacatgctatcaatggt
agcttttccggaacaaagcaacaggaaatcgtggttgccaagggcaaaattcttgagatt
atgcgcgttgatgcaagttcgggtaaactatacactttgcttacaacggaagtgtttggg
atcatccgttcgttaatgccatttcgtttgacaggtggtacaaaagactatattgtaatt
gggtcggattccggccgcattgttgtactggaatacattccttctaagaacatatttgag
aaagtgcagcaagaaacttatggcaaaagtggttgccgtcgcataattcctggacagtac
cttgcaattgacccaaagggtcgagcacttatggtcggagctgtcgaaaagcagaagcta
gtctatgtgatgaaccgtgattctcaagcccggctcacaatttcatccccacttgaagcc
cacaaatcgaatactcttgtctaccacatggttggtgttgatgtaggatttgagaatccc
acattcgcttgcattgagatggattatgaggaggctgaccaagatgccactggcgaggcc
gcaaggtctgcccatcagctactcacctattacgaattggatctcggtctcaatcacgtc
gtacgcaagtactctgaaccactagaggagcacgctaactttttgatcacagtaccaggt
ggaaatgaggttcactctgggattcttatttgctccgagaactacatcacttacaagaat
ttcggtgatgagcccgatattcgttgtcctattcctcagcgtcgcaatgatctggacgat
ccagaccgaggacttttgtttgtttgcagcgctacacacaggaccaagaacctcttcttt
tttctcgcccaaactgaacagggcgatgttttcaaaattaatcttgaaaaggacaaagaa
actgtcactgagattcgcttaaagtattttgacaccgtgcctgtagcttcggcgatgtgt
gtgttgaaaacgggctttctttttgttgcctcagagtttgggaatcaccacctatatcaa
attgctcatctgggcgataatgacgatgagcctgaattctcgtcggctatgccgttggaa
gaaggcgacactttttacttctcgccccgcccactgaagaatttgatcgaggtggacacc
attgagagcctttcccccatcacaggtcttcatatcgctgatctagccaatgaggacact
cctcaaatggctgtgctttgtggtcggggtccaaggtctacgtttcgccttcttcgtcac
ggcttagaggttacggaaatggccaaatctgacctacccggcagtccgaacgcagtatgg
acggtaaaacgcaattcggaagaggagtacgattccttcattattgtctctttcgtcaat
gcaactctcgttctctccatcggtgagactgttgaggaagtgactgattcgggttttctg
ggcacaacgccgactctgacgtgctcacaactgggcgatgatgctctcgtgcaggtttac
cctgatggtattcgacacattcgcgcagacaagcgcataaatgtgtggcgcacccccggc
aagaagacaatccaacggtgtgctgtgaaccgacgacaagtggtcattgcactgaccggt
ggtgagttggtatattttgaaatggatgccactggtcagttgaatgaatacacggaacga
aaggagatgcctgcagatgtcatctgcatggctctcgggcgcatcccgcctaatgaacag
cgctctcgcttcctggccgttggtctggccgacaacactgtccgaatcctctcactcgat
ccttcggattgtctatcgcctctcacaatgcaaggtctcccgacagcagctgagtctctg
tgcatcgttgaaatgggtgctaatgagtcagaaaatacagctggtggtggtattctctac
ctcaacatcggtctcaacaatggtgtcctcttccgtgtggtgttggatccagtaacaggg
gagctctccgatactagaactcgatacctcggtacaagtcctgtaaaactatttcgcgtc
gccatgcagggtggtgatgcggttttggcggtgtctagtcggtcctggctttcatacatg
taccagagccgtttccatatcatcccactctcctatgaggctctcgaattcgcctcaggt
ttctcctcggaacaatgtcctgagggaattgtagctatttgtgagaactctctcagaatt
ttagccttggaaaagctgggcgcagtgtttaatcagactagcactctcctccaatacaca
ccacgaaggtttgtcttccaccccgaatcgaacaacacttttattattgaaaccgatcat
aacgccttcacggacgaagtgaaggaggagaggcgcagagagatgagtgaacgaattctc
gcctcattgggggatgtgcgtgagagggagaaggcggcaggcttcctgtctcgatcattg
cctgaggatgtgtttggagctccaaaggccggtccaggcatgtgggccagtctcctgcgt
ttgatgaatccgctcagtggggagactcttcaaatctgcagatttgctcaaaatgaggcc
gcacatgccataacactggctacattcactaaccgacccggcgattactacgtgatcgtc
gccctctccaaggagttggtgcttaaccctcgcagctgctcaggtggatttttgcgcacc
taccgcacaacacccacgggcgacttcctggaattcgtccacgacacttccgtggaggac
taccccgctgccctttgtgcctaccagggccgtctcctcgccggcattggacatcgtctg
cgtctctacgacatgggcaaaaaaaagcttctcaagaagggcgagaatcgccacttcccg
aatctaataaacggcatttacggcatcggacaccgtattctggtgacggacgtgcaggag
agtcttttctgggtgcgctatcggccacgggcagacaatcagatggtgatatttgcggat
gacgccagtccgcggtggatcactcagctggctgtcttggacaactccaccgccgcagtg
gccgacaagtttggcaatatcatcatccttcgtctgccacctgatgtcaatgacaatgtg
gaggaggatcccagtgggaatcgatcactgtgggacaggaacgcccttggaggtgctagc
caaaaactcgagatggtttgccacttctacgtgggcgaggtggtgacatctcttcaaaag
gctaccctgatcccgggcggttcggagggtctggtgtacgccacgctctcgggcagtctg
ggcatcctcatccccttcgcttccaaggacgcctactccttcttccagcatctcgaactt
cacatgcgctcggagaatatctctctcgtgggtcgtgaccaccttcactatcgctcactg
tactatccatgcaagaacgtaatcgacggggacctctgcgagatgttcaacactctggat
gcggataaacagcggaacatcgcggaggagatggacaaggtccccaccgacattgccaaa
cgtctagaggatatgcgcacccgctgcgccttctaa
DBGET
integrated database retrieval system
