Echinococcus granulosus (hydatid tapeworm): EGR_02965
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Entry
EGR_02965 CDS
T05553
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_02965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egl03041
]
EGR_02965
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EGR_02965
Spliceosome [BR:
egl03041
]
Complex C
Other components
Step II factors
EGR_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
PhoH
AAA_16
Helicase_RecD
ABC_tran
AAA_7
TsaE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
36338680
NCBI-ProteinID:
XP_024353409
UniProt:
W6UMC4
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MIVGGDDKAFRKLEYYSLVSKVCTELNNHLGLEDKALGIFKDALAKHDAEFSDALIASIL
RLVQTMLPNFLKKALKKPQDGLSKKGETFDADTIKADATTRKKLVPALCLPDESTEQMNR
RLRDDEGEADHSSEYSHSKEGGECKVDSPDVDAANMMRNLEALLGDCRKEAESAQRKLGH
ASPKRGYEIIIRNHKCSSDGRSPHPSTRGDRRHRSPHRRSHRDSRSPRRNKSPSHRSNCR
DRSRGLDHRSRDRDRSGSFSSSRRIRPKLKSELPVEPIVGKVFPGRVTSVLAFGAIVQLE
GLQKRWEGLVHVSQLRRESRIGSVSDVVQRHQKVYVKVLSFTGTRTSLSMRDINQETGED
LNPPSASAVPSDIRSRDEASRLEGSSGMNEDGDDFGGRNPDRPFEEPSSMMGLRRDALED
DFGPKRKIQRISSPERWEFKQMISAGVIDKSELPEFDEETGLLPREDDESDEDIEIELVE
EEPPFLKGHGRHAMELSPVRIVKNPDGSLQQAAMMRQALQKERREEKQQERQNQLSSERA
TAHERMGKEWQDPMAATMGSKPVAQTSRTVDQFKDVPEWKKAVHGASTRTGAIGKKIVRS
IIEQRQSLPIYKLKDELLKAIEENKILIVIGETGSGKTTQITQYLAEAGYTTAGRIGCTQ
PRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTTPETKIKYMTEGMLLRECLIDPDLC
QYSVLMLDEAHERTIHTDVLFGLLKKAIKKRDDFKLIVTSATLDSVKFSQYFFEAPIFTI
PGRAFPVEILYSLEPESDYLDAALNTVMQIHLTEPPGNLFCSSFIISDILVFLTGQEEID
SACEILYDRMKALGPDVPELIILPVYAALPSEMQSRIFDPAPPGSRKVVIATNIAETSLT
IDGIFYVIDPGFVKQKVYSSKSGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTERA
QRDEMLSTNVPEIQRTNLASTVLQLKAMGINDLLSFDFMDPPPLQTLVAAMVTLHALSAL
DDEGLLTRLGRRMAEFPLEPMLSKMLIMSVQLACSEEVLTIVSMLSVQNVFYRPKEKTEL
ADQRKAKFHQPEGDHLTLLAVYNAWKNNKFSAPWCYDNFVQARTLKRAQDVRKQLLGIMD
RHKLAVLSCGKKTALVQKAILSGFFRNAAKKDPQEGYRTLVDQQVVYIHPSSSLFNRQPD
WVVYHELVMTTKEYMREVTTIDPRWLVEFAPKFFKFGDPTKLSRAKKSMRIEPLYNKHEE
KDSWRISRVPRKFHVKVTF
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgggggtgatgataaggcctttcgaaagcttgaatattattcccttgtttca
aaagtgtgcactgagttaaacaatcacttaggattagaggacaaggccttgggcatcttt
aaggatgcgcttgctaagcacgatgcagagttttcggatgcgctgattgctagcattcta
cgactagtgcaaacgatgctccctaattttttaaagaaagctttgaaaaagcctcaagat
gggctatctaagaagggggaaacttttgatgcagacaccataaaagctgatgcaacgacc
aggaagaagttggttcctgctctttgtctgccagatgagtcaacagaacaaatgaatcgt
agacttcgtgacgatgaaggtgaagctgatcattcaagtgaatactcacattccaaagaa
ggtggagagtgtaaagtggatagtcccgatgtagatgcagctaatatgatgcggaatctt
gaggctctgttaggcgattgtcgtaaagaggctgaaagcgcgcagaggaagctgggtcat
gcctcaccaaagcgagggtacgaaataattatacgtaaccataaatgcagtagtgatggt
cgatctccccacccgtccactcgtggtgaccgtcggcatcgaagtccacatcggcgttcg
catcgcgattcaagatcgccccgacgcaataaatcgccgagtcatcggagcaattgtcgt
gaccgatctcgtggacttgatcacagatctagggatcgtgatcgatctggatcattctct
tcgtctcgacgcattcgtcccaaacttaaatccgagctcccagtggagcccattgttgga
aaggttttcccaggtcgcgtcaccagcgttctcgcttttggcgccatcgttcagcttgag
ggacttcagaagcgatgggagggcctagttcatgtctcacaattacgtcgagaaagtcgt
attggtagtgtcagcgatgttgtacagcgtcatcaaaaggtttatgtcaaagtgctatct
tttactggaactcggactagtctgagtatgcgcgatatcaatcaggaaacgggtgaggac
ctgaatccaccttcagccagcgcggttccgtctgacattaggtcacgtgacgaggccagc
cgacttgaaggtagcagcgggatgaatgaggatggggacgactttggtggacgtaatccc
gatagaccatttgaggagccttcttccatgatggggcttcggagagacgctcttgaggat
gatttcggcccgaagaggaagattcaacgtatcagctcccctgaacgctgggagtttaag
cagatgataagtgctggtgttatagataagtccgagctacctgagtttgatgaagagacg
ggcctcttgcctagagaggacgatgaatcggatgaagatattgaaattgagttggtggag
gaggaaccgcctttcctcaagggtcacggccgccacgctatggaattgtcccctgtgaga
atagtcaaaaacccagatggttcactgcagcaggctgccatgatgcgccaagcactgcag
aaggagcgtcgagaggagaagcagcaggagcgtcaaaatcaacttagcagcgaacgcgcc
actgcccacgagcgcatgggcaaggagtggcaagaccccatggctgcaacaatgggaagc
aagcccgtggctcagactagtcgcacggtcgaccagtttaaggatgtgcccgagtggaag
aaagcggttcacggtgcaagcactcgaactggagctattgggaagaagattgttcgctca
atcattgagcagcgccaatctctgcccatctataaactcaaggatgaactgttgaaggcc
attgaggagaacaagatactcattgtgattggtgagacaggcagtggtaaaactacacag
atcactcagtaccttgcggaggccggctataccacagcaggccgcatcggctgcacccaa
cccagacgtgtggccgctatgtccgttgctaaacgggtatctgaagagtttggctgtcgg
ttgggtcaggaagtcggttacactatccgttttgaggactgcaccacgcccgagacgaag
ataaagtacatgacggagggtatgctgcttagagagtgcctcatcgaccccgatctctgc
cagtactctgtcctcatgttggatgaggcccacgagcgcaccattcacacagacgtgctc
ttcggtctcctcaagaaggccattaagaaacgtgatgatttcaaacttatcgtaacctca
gccactttggattcagtcaagttctcccagtacttcttcgaggcgcctatatttacgatt
cccggtcgggccttccccgtcgagatcctttacagtctggaacccgaaagcgactatctc
gatgccgcactcaataccgtcatgcaaatccatctcaccgagcccccaggcaatttattc
tgctcgtcatttattatcagtgacattttggtctttctaactggtcaggaggagatagac
tcggcttgtgaaatcctatatgaccgcatgaaggcgctgggtcctgacgtgcccgagctc
atcatcctaccggtgtatgcggcgctgccctcggagatgcagtctcgcatattcgacccc
gcaccaccaggcagtcggaaggtggtcatcgctaccaacattgcagagacctctctcacc
atcgatggcatattttacgtcattgaccccggcttcgtcaaacaaaaggtctacagcagc
aagtctgggatggatcaacttatcgtcacacccatttctcaggctcaagcgaagcagcgt
gcggggcgggctggcaggacggggccgggtaagtgctaccgcctctatacggagcgcgct
caacgtgacgaaatgctctccaccaacgtgccggaaatccagcgcaccaacctcgccagt
actgtgcttcagctaaaggccatgggcatcaacgatctcctctcatttgattttatggat
cctccccctcttcagactctggtcgctgccatggttactcttcacgctctttctgcactt
gatgatgaaggtctgctcactcgtctcggacgaaggatggctgaatttcctcttgaaccg
atgttgtccaaaatgttgattatgtctgtccaacttgcctgttctgaggaggttcttact
atcgtgtccatgctctctgttcaaaatgttttctatcggccaaaggagaagacggaattg
gcggaccagcgcaaggctaaatttcatcaacccgaaggtgatcacctcaccctactggcg
gtctacaatgcatggaagaataacaagttctcagcgccctggtgttacgacaattttgta
caggccagaacacttaaacgggcacaagatgtacgaaaacaacttcttggtattatggac
aggcataaacttgctgtgctttcgtgcggaaagaagacggctcttgtgcagaaggccatt
ctctccggtttcttccgtaatgcggctaaaaaggatccgcaggagggctatcgcacactc
gtggatcagcaagtggtctacattcatccctcctcctcccttttcaacagacaacccgac
tgggtggtctaccatgaattggtgatgacgacgaaggagtacatgcgcgaggtcaccact
attgatccgcggtggctggtggagtttgcgcctaagttcttcaagttcggggatcctacc
aaactgtcgagggcgaagaaatctatgcgcatcgaaccgctctacaataaacatgaggag
aaggactcctggcgcatctcccgtgttcctcgcaaattccacgtcaaagtcaccttctaa
DBGET
integrated database retrieval system
