Echinococcus granulosus (hydatid tapeworm): EGR_03463
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Entry
EGR_03463 CDS
T05553
Name
(RefSeq) ATP-dependent RNA helicase cgh-1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGR_03463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_03463
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_03463
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EGR_03463
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
EGR_03463
mRNA degradation factors
5'-3' decay
Decapping complex
EGR_03463
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
EGR_03463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CMS1
DUF5876
Motif
Other DBs
NCBI-GeneID:
36339178
NCBI-ProteinID:
XP_024352845
UniProt:
W6V5N7
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MQDGDQASEADNWKASLNLPERDARLKTADVAPTEGCTFDSFCLKRNLLKGIYEKGWEYP
SPVQRSSIPVALTRRDIIARAKNGTGKTGAYSIPILDSIDPSLNKIQACILVPTRELALQ
TSQICIELAKHMDIKTMLMIGGTYLKDDLIRLSQTIHVVVGTPGRMIDLMSRGFVDLSYC
KTVVLDEADKLLSEELKNAVEKILEKVDKNRQLLVYSATYPVVVQSFISKHLKNPFEINL
MERLTLRGITEYYAYVQEKFKDEANMDEETKSALYYGRVLQQREALNNGAE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggtgatcaagcttctgaagcagacaattggaaggcttctcttaaccttcct
gaaagggacgcacggttaaagactgctgatgttgctcctactgagggctgtacctttgac
agcttttgtcttaagcggaacttattgaaagggatttatgaaaaggggtgggagtacccc
tctccagtccaaagatccagtattcctgttgcgctcacccgcagggatatcattgctcgt
gccaaaaatggtactggtaaaactggtgcatattccatccctattttggattcgatcgac
ccgtctctgaataagatacaagcatgcatattagtaccgacgcgtgagctagcacttcaa
actagtcaaatttgcatcgaattggccaagcatatggacattaagacaatgcttatgatt
ggcggaacatatctgaaagatgacctgattcgtttgagtcaaactattcatgtggttgtc
ggaacaccgggacgcatgattgatctaatgtcacgaggcttcgtggatcttagctactgt
aagaccgttgttcttgatgaagcggacaaattgctgtctgaggagttgaagaatgctgtt
gagaagatactggagaaagttgataaaaataggcagctcctggtctattcagctacatac
cccgtggttgtacagtcgtttatatcaaaacatctcaaaaatccattcgaaatcaatctc
atggaacgcttaacactcaggggcataacggagtactatgcgtacgtacaggagaaattc
aaggacgaagccaacatggatgaggaaacgaagagtgcgctttattatggtagagttctt
cagcaacgagaagcccttaacaatggcgccgaatag
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