KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_03696
Entry
EGR_03696         CDS       T05553                                 
Name
(RefSeq) Negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    EGR_03696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egl03021]
    EGR_03696
Transcription machinery [BR:egl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     EGR_03696
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 36339411
NCBI-ProteinID: XP_024352602
UniProt: W6UJU8
LinkDB
Position
Unknown
AA seq 1080 aa
MDNDGKKPFAFPVMKKSIEELFMNGTTSKEDIERFQEKYWEQMVPNFSQALKILDLHDVS
RHSVLWNINDRLLEAVKSRILAKAAEGGDDKKHQKLWQKLIRTGMIYIHHPYMRSAIMMV
LGQMNSIKSRYVSLIVDNNYLYKDAPLPVLRHIWMTNQKKFKEEIMNVLNAYQNAMSEAL
LDSLLASVTSANADTLPILYWPQRRRRKDLSLIKIVEMIGENENLYEKALEILREESVKY
QQLIEKSATRRTVSTSECIKKLTDSKAGKGGSQKKEESVTFHHIFISPALLPAPQSLAAA
LLCTLRFDLLMSFIEAKLDRICVTDPIHHFVWCMDACIKSKRIDRRHANELAAHLNRHHR
RHSIHLSLSSEIGLDQDTSEDWAPNLDERGGRKKSMRTQRAGEKRALEEVEVDSDDGPSK
SDQGVLAFQRFARFWNLMPYFRDIQIVCRDPWVVYTVCSSLLRVVITGLYDDKSPKSIPE
VPFLVHLLMRGLESDLCLPEVVLNKEISKSEPKNKRSRKHVVHEESPTPPPQSKLDPATV
LITQVLPAAAQLHLTTWRSQVCEEIRSIANRIWPKSGAGGSDSSSHLRPSATWQRRLDAA
QPINVAISPAYLAHPVGHFFLQYHALFALERREWTVLRALLKAAAGAAQARPSKAPRSSK
CVSSSPMPASLNQLTIGFRWRPDCLQAISLGIASLPVSSDDSTTGSGASVPSTPATSDGG
SGSGFMSEKSSAGATDPSPASSTTGATSPLPSATAVSTIANNASFSTVTRAELASLLRTS
LPLQSDLQLLVLAQCARLVPATPSTPTTPGSTGAVTPMPNFFSTTEMGVSTNVAPRSVSE
KERLLNALSRHVEYPPQESSSGAGEDHSVVSPPLTPTGFKSSNAKVVEALETLRRELERS
TSAGTISMMGTSKLASGMSATPLSPLSGGGTMSQQQCGMALPSRLMPPPMRFVPRSGGAR
YVAGMNTFPMATPLTNPGLSMPPPPSPLAPPPGRLLPSPPLADYRPPSPGVDASSAVAGS
GSTGSSYPTYATPMGTDMGEGGCGLGSYSVSLSPTGDLRRYAAPMESHSPSSPPQPPASP
NT seq 3243 nt   +upstreamnt  +downstreamnt
atggacaacgatgggaagaaaccttttgcttttcccgtaatgaaaaagtcaatagaagag
ttgttcatgaacggaacgactagcaaggaggatatagagcgttttcaagaaaagtattgg
gaacaaatggtgccgaatttcagtcaggctctcaaaattcttgaccttcacgatgttagt
cgtcatagcgttctatggaacataaacgatcgccttttggaagctgttaagtcgcgcatt
ttggcgaaagccgccgaggggggcgatgataaaaaacaccaaaagctctggcaaaagttg
attcgtactggcatgatctatattcatcatccatacatgcggtcagctattatgatggtt
cttgggcaaatgaactcaattaaaagtcgttacgtctccttgatcgttgacaacaactat
ctgtataaagatgcccctcttccagtccttcgtcatatttggatgactaatcaaaaaaaa
tttaaagaggagataatgaacgttttgaacgcctatcaaaatgcaatgtcagaggcacta
ctcgattctcttttggcttctgtaacttcagccaatgctgacaccttgcctattctctac
tggccccaacgtcggcgtcggaaagacctgtctttgataaaaattgtcgaaatgatagga
gaaaacgagaatctttatgaaaaagcgcttgaaattttgcgggaggagagtgtaaaatat
caacagttgatagaaaagtctgccacccgtagaacagtttcgaccagtgaatgcatcaag
aagctcacggatagtaaggcaggcaaaggtggtagtcaaaagaaggaggaaagtgttaca
tttcaccacattttcatttcgcccgcccttctgcctgccccgcagtctttagcggccgca
ctgctctgcacccttcgttttgatctccttatgagcttcatcgaggccaagctggaccgg
atttgtgtaacagatccgatccatcactttgtctggtgcatggatgcctgcatcaagagc
aagcggatcgaccgtcgtcatgccaatgagctggcagctcatttgaaccgacaccacagg
cgccattccatccatttgtctctctcctccgagattggactggatcaggatacttctgag
gactgggcccccaacttagatgaacgtggaggtcgaaaaaagtcgatgagaactcaaaga
gctggcgagaaacgcgcgttggaggaggtggaggtggactcagatgatgggccatctaaa
tcggatcagggagttttagccttccaacggtttgctcgattttggaatctcatgccgtat
tttagagatatacagattgtatgtcgtgatccctgggttgtgtacaccgtgtgttcctcc
ctcctcagggttgttataacgggtttatatgatgataagtcacctaagagcatccctgaa
gttccatttctcgttcatttgctaatgcgaggcttggagagtgatttgtgcctaccggag
gtggttttgaacaaggagatatcgaaatcagagccgaagaataagcgatcccgtaagcac
gtggtccatgaagaatcgccaactccaccgccgcaatcaaagttggacccagcgacggtt
ctcatcacccaagttctcccagccgcagcgcagctccatctcaccacctggcgtagccag
gtttgtgaagaaattcgtagcatagcgaatcgaatttggcccaaatccggtgctggcgga
agcgactcctcctcccacttgcgtccctctgccacatggcaacgtcgtcttgatgctgct
cagcctataaacgttgcgatttcacccgcctatttggctcatccggtgggacattttttc
ctccaatatcacgctctctttgcactggaacgtcgtgaatggacggttctccgagctctc
ctcaaggctgcagcaggggctgctcaagcaagaccctcaaaagcgccccgttcatcgaaa
tgtgtatcttcttcaccgatgcctgcgtctttaaaccagctcacaatcggattccgctgg
cgtccggattgtctgcaagcaatttcattaggaattgcatctctgcctgtctcctcggac
gactcaacaacaggaagtggtgcgtcggttccatcaacgcctgctacgtctgacggaggc
agtggtagtggatttatgtcggaaaagtcgtctgccggagccactgatccctccccggct
tcctccacaacaggtgcgacctcgcccctcccttctgccacagctgtgtccaccattgca
aataatgctagcttttccactgtgactcgcgcggagctagctagcctgctccgcaccagc
ctgcctcttcaaagcgatctccaactcctggttcttgcacagtgcgctaggttggtccct
gcaacaccctctactccaaccaccccaggctcaacgggtgcggtcactccgatgccgaat
ttcttctccactaccgaaatgggggtgtctacgaatgttgcacctcgaagtgttagtgaa
aaggagagattactcaatgctttgtctcggcacgtggagtatccgccccaagaaagtagt
agtggtgcgggagaggatcattctgtagtctctcctcctctcacacctacgggattcaaa
tcgtccaacgcgaaggttgtggaagctctcgaaactcttcggcgggagttggaacgatcc
acatccgccgggacgatttcaatgatggggacatcgaaactggcttctggaatgtcggca
acaccgctgagtccgttgagtggtggaggaacaatgtcgcagcagcagtgtgggatggct
ttaccgagtagacttatgccacctccaatgcgttttgtcccacgctctggtggagctcgc
tacgtggcagggatgaatacgttccccatggcaacacctctaaccaatcctgggttgtca
atgcctccaccgccgtcaccactagcacccccgcctgggagactcctgccgtcgccaccg
ttagcggattatcgaccgccgtcgcccggtgtcgacgcatcttcggcagttgctggaagc
ggtagcactggcagtagttatcccacctatgcgactccaatgggaacagatatgggggag
ggaggatgtggattgggcagctactcggtgtcattgtcaccgactggagatttaaggcgc
tacgctgctccgatggaatcacattcgccgtcatcaccgccgcagccgccggcatcaccg
tga

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