KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_03712
Entry
EGR_03712         CDS       T05553                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03420  Nucleotide excision repair
egl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EGR_03712
   03460 Fanconi anemia pathway
    EGR_03712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egl03032]
    EGR_03712
   03400 DNA repair and recombination proteins [BR:egl03400]
    EGR_03712
DNA replication proteins [BR:egl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    EGR_03712
DNA repair and recombination proteins [BR:egl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     EGR_03712
SSDB
Motif
Pfam: ERCC4 Mg_chelatase_C
Other DBs
NCBI-GeneID: 36339427
NCBI-ProteinID: XP_024352618
UniProt: W6USS5
LinkDB
Position
Unknown
AA seq 1007 aa
MSVLLDYEKNILLDVNEDSCMFVCAEGLDLDTILHTIIKLHNDPHNLVLISNYSLPEAKY
IAAKFVLENEAYLPFIITANVSAQERLQAYRRGGVVFVSSRILVVDLLRGTMPVELVTGV
LVLRCHILHESSQESFMLRLLRERNPQIFIKAFTDNAIALMSGYNRVEHLMSQFGVSRLL
LWPRFNLDVVNTLSKCPLNVEEVQVFLTEESSTCQRCLLEMIKATLRELVDINPILNNDE
FTLESALTNSFHQLTSLYIDPIWHHLTQTSHRLLADVAGLRRLLFQLIDFDAVTFLDALE
DLRQAELSSLRMSKSAQISSLQRDGNCANWLLMSQAEQMLSVARSRVYNNYEKRTYTVEV
PPKLIAITSILEDVIVKLTDDGLQQKFPVLILLRHTRSVELLDYYLRHGRAKLQDWLVQG
RSAYEHPAESSETESPPLKRVPLEPYREPTVSKYFCRGRSGSKQIIACTGAPCIPDKCSK
FTESDIPSKPQEEPKAAEIVNVEDPVLDLPAGCSAVTFTTLEGRELQVILRVPPPGCGEE
GATASIDSRSLDGPAGRLGAVLARLRPYCVIFFEPRVSWIREVEVYAAKEAIRRTREGLN
PHSLSIYFMVYKDSVEEQRYLTRLRREKEAFEGLITLRASAVVKKVEPSISVPAVDIESG
NSSEPAPTPTVFVDVREFRSELPALLHRKGLRVNPITLTVGDYILAPHICVERKSVSDLI
SSLNSGRLFQQCTVMSRHYLNPVLLIEFSMPANGVTYKAPRFPNIAPPATSASFALFTGR
NAVVVGDARTDLDPRHLLPRLVLLLLHFPRLRVLWSVTPYCTAELFAELKVGRAEPTLEQ
LPQDSNGLCEENAEAVEMLLRLPGISWRNYQRVMARVDTIADLAGCSLERLTEILENRTY
LSRHILNVRFKSVPLSSLGRVMETDKQMNLTTRRFWDCGKKWLLGCNLKWPSLTECAQKL
YNFLHSEWAPPPQSSAGTMMELVVATAEGKRPRFDLAARVKTRTKRK
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgtctgtgctactggattatgagaaaaatattctccttgacgttaacgaagacagttgc
atgttcgtttgtgcagagggacttgatcttgacactatattgcatacgattatcaagctt
cacaatgatcctcacaacttagtgttaatatcaaattattccctcccggaagctaagtac
atcgcggctaaatttgtcctagaaaacgaagcatacctcccttttataattacagctaat
gttagcgctcaggagcgccttcaagcctatcgccgtggtggggttgtttttgtcagttct
cgaatacttgttgttgacttacttcgaggaacaatgcccgttgaacttgttactggggtg
cttgttttgcgatgtcacattcttcacgaatccagtcaggagtcttttatgctccggttg
ttaagagaaaggaatccacagatcttcataaaagcattcacggataacgccattgctctg
atgtctggttataatcgagttgaacacctgatgagtcagtttggtgtttcaaggcttctt
ctttggccaaggtttaatttagatgtggtcaatacactatcgaaatgtcctctaaatgtc
gaagaagttcaggtattcttaacagaggaaagctctacttgccaacggtgtcttctggaa
atgattaaagctactcttcgtgagctagttgatatcaaccccatcctaaataacgatgaa
tttacccttgaatcggctctgaccaattcattccatcaactgactagtttatatattgac
cccatttggcatcatttgacacaaactagtcaccgccttttggcggacgttgctggcttg
agacgtcttcttttccaactcatcgatttcgatgcagttacctttttggatgctttggag
gacctccgtcaagccgagctgtcgtctcttcgaatgagcaagtcggcgcaaatttcatct
cttcaaagagatggaaactgcgctaactggctccttatgagtcaagccgaacaaatgctc
tcagtggctcgtagtcgagtttataataactacgaaaaaagaacctatacagtagaagtg
ccacccaagctaattgcaatcacatcaattctagaggacgtgattgtcaaattgacggac
gatggtctacagcagaaattccctgttcttattcttcttaggcatacacgaagcgttgaa
cttctagactactatctacgccatggtagagcgaaattacaggattggttagtacaggga
aggtcggcttacgaacatccagcggaatcgtctgaaacagaatcgccacctttaaaaagg
gttccactagaaccctatagagaacccacagtatccaaatatttttgtcgaggtagaagt
ggatctaagcagattatcgcctgtactggggctccatgtatacctgacaagtgttccaag
tttactgaatccgatattccttcaaaaccacaagaagaaccgaaggcggcagagattgtg
aacgtggaagacccagtcctagatttgccagccggatgctctgcagtcacttttacgacc
ttggagggaagagaacttcaagtaattcttcgtgttccaccaccaggttgcggggaggaa
ggagcgacggcgtcaatcgacagtcgaagtctagatggaccggctggacggctgggggca
gtattggcgcgtctccgaccatattgtgtcatttttttcgaacctcgcgtatcatggatt
cgagaagttgaggtctatgctgctaaggaagccatacgtcgaactcgtgaaggtttaaat
ccacattctctcagtatctatttcatggtgtataaagattctgtggaggaacaacgatat
ctcacgcgacttagacgagagaaggaggcctttgaaggcctaatcactctgcgcgcctcc
gctgtcgtgaagaaagtggaaccatcgatatctgttcctgctgttgacattgaatctgga
aattcttcggaacccgccccaacaccaaccgtatttgtagacgtccgtgaatttcgaagc
gagctaccagctcttctgcatcgaaagggtttgcgggtgaatcccataactctgacagtc
ggagattacatcctggcaccgcatatttgcgtggaacggaaatctgtcagtgatttgatt
agttcgttgaactcaggtcgtctgtttcaacagtgcactgtaatgtccagacactatctt
aatccggtactactaattgaattctcgatgcctgccaatggcgttacttacaaggcacca
cgatttccaaacatcgcgcctcctgctacgtcggcgtcttttgctctattcacgggacgg
aatgctgtagtggtgggagacgcaagaacggatttggaccctcgtcatctgttgccgcgt
ctagtcctccttctccttcactttccgcgtttgcgagtactctggagtgttacgccgtac
tgtacggcggaattgtttgcagaactaaaagtgggacgcgcagaacccactttggagcag
ctgcctcaagatagcaatggactgtgcgaggagaatgcagaggccgtggaaatgctgttg
agactacctggtatctcctggcgtaactaccaacgcgtgatggcgcgtgtcgacaccatt
gccgatcttgctgggtgcagtctcgaacgcctcactgagattctcgaaaatagaacgtat
ctgtcaagacatattttgaatgttcggttcaaatcggttccactttcttcacttgggaga
gtcatggagactgataagcaaatgaatctcacaacccgtcgcttttgggattgtgggaag
aaatggcttttgggctgcaatcttaagtggccaagtttaactgagtgcgcccagaagctg
tacaactttctgcactccgagtgggcaccaccaccacaatcttctgctggcacaatgatg
gaattggtggtcgccactgcagagggcaaacggcctcgctttgaccttgctgctcgtgtc
aagacccgtaccaaacggaagtaa

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