Echinococcus granulosus (hydatid tapeworm): EGR_04072
Help
Entry
EGR_04072 CDS
T05553
Name
(RefSeq) Polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EGR_04072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_04072
Enzymes [BR:
egl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
EGR_04072
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
EGR_04072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_16
AAA_18
AAA_22
MMR_HSR1
CbiA
nSTAND3
Sigma54_activat
AAA_10
AAA_11
TniB
Motif
Other DBs
NCBI-GeneID:
36339787
NCBI-ProteinID:
XP_024352235
UniProt:
W6V4H3
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MNTAGVGSTTPTTEYALEKYQMLRYEANAQVKIVMTSGTAEIFGTELVCGTDLVLEAGER
GTVVTFHGCKITVKGSGLDAFVMDAVEDHDLLQVYVNIHANLQEARKKATEDQSRGPRVL
VCGPENVGKSVLCRTLANYAARRGSKPILVDVNVCIPSTIAALAVTKPYDLLEGWGLEED
PLTPEKKQAGLDAIRTTAAAFEVDTVLVIEDGFLSTFLQEDLPKDVTIIRLPRSSGAVNF
TPKQSMRQRDLRISAYFHGENLKRRLHPHHLRLSASEYTVYRVGSEAIPDALLPHGARDA
EEETQSWRTPIALTVSRDALKNRMLAVSQATDPEQIASSPVFGFVVVLSVAEDRTHFNVL
SPSPELPPSCLLVASICYVDPEGA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagcaggtgtcggttcgactactcccactaccgagtatgcactggagaaatac
cagatgctacgctacgaggccaacgcacaggtcaaaattgtcatgacttcgggtacagca
gagatatttggaacagaacttgtttgtggcacagatctagttttggaagcgggtgaaagg
ggaacggttgtcacttttcatggctgcaaaatcaccgtcaaaggctcaggtctagatgct
tttgtgatggatgctgttgaggaccatgatctccttcaagtctacgtaaacattcatgcg
aatcttcaagaagcgcgtaagaaggccacagaagatcaatctcgtggaccccgcgttttg
gtttgtggccctgaaaatgtcggcaagtctgttctctgcaggaccttggccaactacgct
gctagacgtggctccaaaccaattcttgttgatgtcaacgtttgtattccctccaccatt
gcggctctggcagtcactaagccctatgatctattggagggatggggtcttgaagaagac
cctttgacaccggaaaaaaagcaggcgggtttggacgcgatacggacgacggcggcagct
tttgaagtggacacagtgttagtcatcgaggacggctttttgagcacatttttgcaggag
gatctgcccaaggatgttacgattattcgactaccgaggtcttccggtgccgtcaacttt
acccccaagcagtcaatgcgtcaacgcgatttgcgaatcagtgcctacttccatggcgaa
aatcttaaacgacgtctgcatccccaccacctgaggctatccgctagtgaatacactgtg
tatagagttggcagcgaggccattccagatgccctgcttccacacggagcacgggatgca
gaggaggagacacagagctggcgaacaccgatcgctttgaccgtgagtcgcgacgcacta
aagaatcgcatgctggcggtgtctcaggccactgacccggagcaaatcgcctcttcccct
gtcttcggcttcgtggtggtcctctctgtagccgaggaccgcacccacttcaacgtcctc
tctccctcccccgaactccctccctcctgcctccttgtcgcctccatctgttacgttgac
cctgagggtgcctag
DBGET
integrated database retrieval system
