KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_04288
Entry
EGR_04288         CDS       T05553                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Brite
KEGG Orthology (KO) [BR:egl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egl03041]
    EGR_04288
Spliceosome [BR:egl03041]
 Complex B
  Other components
   Complex B specific factors
    EGR_04288
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_Nup120_160 NBCH_WD40 LisH_TPL Beta-prop_IFT122_1st Beta-prop_SCAP Ge1_WD40 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SPT8 WD_LRWD1 RMC1_N Beta-prop_EIPR1 Beta-prop_IP5PC_F Mala_s_1-like Nucleoporin_N
Other DBs
NCBI-GeneID: 36340003
NCBI-ProteinID: XP_024352045
UniProt: W6V437
LinkDB
Position
Unknown
AA seq 541 aa
MRREPTSICSYVSTGCALILQMSIELESADVVRLIEQYLKENNLLRTLQVLQVGDLKQEE
TGVTLNTVDSVESFMNEITSGHWDTVLKVVQNLKLSDHKLMDLYEQIVIELVELRELGAA
RTLLRQTDPMVLLKQNHPDRYLHLENLLARSYFDPREAYLEGQSREKRRQAIASALSGEV
SVVPPSRLLALLSQALKWQQHQGLLPPGTAIDVFRGKAAVREQEEEKPPTQLSATIKLGQ
KTHVECAKFSPDGQYLVTGSVDGFIEVWNFITGKLRKDLKYQAQENFMMMDAAVLCLAFS
RDSELLASGSLDGKVKVWRIQSGQCLRRFEKAHTKGVTAAHFSMDNVHLLTASYDHTIRI
HGMKSGNLLKEFVGHTGFVNDVVFSPDGRHVLSGSADGSVRIWSTRTAECVSNCKTISGL
VGREVPILSVQLMPRNADQFIVCSRSNTIAIMNMQGQVIRSCTNGKREGGEFVGLTVSSG
GEWIYAVCEDRLLYCFNVSSGGKLERTLPVHEKEILGVAHHPHQNLIATFSEDGLLRLWK
P
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgcgaagggagccaacttcgatttgttcatatgtgagcacgggctgtgctttgatcttg
cagatgtcgatcgagttggaatccgctgatgttgttcggcttattgaacagtatttaaag
gagaataatctactgcgtaccttgcaagtactacaggtcggtgatctgaaacaggaagaa
actggtgtcacacttaacactgtcgattctgttgaaagttttatgaatgaaatcacaagt
ggtcattgggatactgttctcaaggttgtacaaaatttgaagctctcagaccacaaactt
atggacctctacgaacagattgtcatcgagctggtagaactgcgagaattaggcgcagct
cgaactcttctccgtcaaacagatcccatggtcctactcaaacagaatcacccggaccgc
tacctgcatttggaaaacctcttggcccgatcctactttgatccgcgtgaggcttatctc
gaagggcagtcccgtgaaaaacggcgtcaggcgattgcctccgcgctatctggtgaggtt
agcgtagtaccaccctcaagactgctggccctgttgagtcaggcgctgaagtggcagcag
catcaaggtctccttccccctggaacggccatcgacgtcttccgcggtaaggcagctgtt
cgtgagcaggaggaagagaagccacccacgcagctttcggcgacaattaagttgggtcaa
aagacacatgttgagtgcgcaaagttcagtccggatgggcagtatctagtgacaggatct
gtggatggttttattgaagtgtggaatttcatcacgggcaagttgagaaaggatcttaag
tatcaagcgcaggagaactttatgatgatggacgcagcggtgctgtgtctggccttcagc
cgcgactccgaactgctggcctcgggctcactggacggcaaggtgaaagtgtggcgcatt
caatcgggtcagtgtctccgacgttttgagaaagctcatacgaagggtgtcaccgctgcc
cacttctccatggacaatgtccacctcctcactgctagttacgatcacaccatccggatt
catgggatgaagtctggtaacctactgaaggagttcgtgggtcacacgggctttgtcaac
gacgtagtcttcagccctgacggtcgtcacgtgctcagcggcagtgcggatgggtcggtc
cgcatctggtccacgcgcaccgctgagtgtgtgagcaattgcaagaccatttcgggcctt
gttggacgtgaggtgccgattttgagtgtgcagctgatgcctcgcaacgcggaccagttc
atcgtctgcagtcgttcaaacaccattgccatcatgaatatgcagggacaggtaatccgc
agctgcaccaatgggaagcgcgagggtggtgaatttgtcggtctgacggtgagttcagga
ggcgagtggatctacgcggtgtgtgaggatcgccttctttactgctttaacgtcagcagc
ggcggcaagttggaacgaaccctcccggtgcatgaaaaagagatccttggggtggctcac
catccacaccaaaacctcatcgccacattttctgaggatgggctgctgcggctttggaaa
ccttga

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