Echinococcus granulosus (hydatid tapeworm): EGR_04356
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Entry
EGR_04356 CDS
T05553
Name
(RefSeq) Protein CASC3
KO
K14323
protein CASC3
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013
Nucleocytoplasmic transport
egl03015
mRNA surveillance pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_04356
09122 Translation
03013 Nucleocytoplasmic transport
EGR_04356
03015 mRNA surveillance pathway
EGR_04356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_04356
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EGR_04356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
36340071
NCBI-ProteinID:
XP_024351926
UniProt:
W6UGS8
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MANPSTVPPRHIGFDAVGDFIRNRNGAASEICMCPCVYFRLAFGMKKKRTTEKSADDQHS
CLEASSIPSSAPPPAKETQKSDTSSERQASSGQVVEQTTRCEETGEASFCDNRMGSKGTD
KVDSGVTENSATPLLSVTSLQHEKSVLNETGETVFSEDDGEEEVNQPDTESSDDDDLAMR
LRRRDGGDSEDEDESEVEGENGDGNEGEDEEEDYYTDDRASQTSSEREVLDSTRGLDDTM
STHEEKEKKKNSDSPVNRRDPTYVPREGAFYLHDARDESGDDVGEVKVTPASETASTRRS
GILAKRWGHDLYIEQQQCPRTTEEIIRRYGYDIRKYGLDPTQEVTSRHVVGGSWKRSQAR
GRGVGFANSHNDVAAFTTKDFPALEERDNYRNRNRRGGSRFHDPKREENLHQRSKTDGHA
STLHVDAGSLEDAPKKGHPIIQRGRRARGFTPHEGQKEVVVVEEFRKRRGSRGRGVSRRF
FNAEGDARRGFHNFNTTRNWGRVASTVVVPKSQPSPQQSQSQLPLQAPRSGKRYSVNRKT
HRPEPSEEGQRVEFVAPTLPDAEMRQLYRSVDPSIVAALVQRHQMENPEAFEAAKAASLS
MVEERTLRVVNREPKSPQKCEHNDPIRPDGDTATTNGES
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccaagcactgtaccgccgcgtcacatcggtttcgatgcagtaggtgatttt
atacgtaatcgcaacggagccgcgagtgagatctgtatgtgtccttgtgtgtatttccgt
ctagcttttggaatgaagaaaaaacgtacaactgaaaaatcagccgacgaccaacatagc
tgtcttgaagcatcatcgattccaagtagtgcgcctccaccagctaaggagacgcaaaaa
tcagacacctcgtctgaaaggcaggccagtagtggacaggtggttgagcagacgacacgt
tgtgaggagactggtgaggcgtccttctgcgacaaccggatgggttcaaagggcacagac
aaggtggattcaggggttactgaaaactccgctactcctcttctctctgtcacttcgctg
cagcacgaaaagtctgtgcttaacgagacgggggaaaccgtcttctcggaggatgatggc
gaggaggaagtaaatcagccagacaccgagtcttcagatgatgatgatcttgcgatgcgt
ttgcgacgacgtgatggtggtgattcggaagatgaagacgaaagtgaagtcgaaggcgag
aacggggatggaaacgaaggcgaagacgaggaagaagattactacacagacgatagggct
tctcaaacctccagtgagagagaggtgctggattccacgagaggtctagatgacaccatg
agtacccatgaggaaaaggaaaagaagaagaactctgacagcccagtgaatcgacgagat
cccacttacgtgccgcgcgagggggccttctacctccatgatgctcgcgatgaatccggt
gatgatgttggcgaagtgaaagtgactccagcatcggagacagcctcaacccgtcgttcg
ggcatactggcgaagcggtggggtcacgatctttacatagagcagcagcagtgtccgcgc
accactgaggagataatccgtcgctatggctatgacattcgtaagtacggtcttgacccc
actcaggaggtcacatcgcgccacgttgttggcggctcctggaaacggagtcaggcacgg
ggaaggggagtggggttcgctaattcgcacaatgatgttgccgccttcaccacaaaagac
tttcccgcattggaagagcgtgacaattatcggaatcgaaatcggagagggggtagtcgt
ttccatgacccaaaacgcgaagaaaatctgcaccaacgctcgaagacggacggtcacgcc
tctactctacatgtagacgctggaagcttagaagatgcaccgaagaagggccatccaatc
attcaacgaggtcgtagggctcgtggctttacccctcacgaaggacagaaggaagtggta
gtggtggaagagttcaggaagcgtcgaggcagtaggggtcgtggagttagtcgtagattt
tttaacgctgaaggtgacgctaggcgtggtttccataatttcaacactactcggaattgg
ggtcgagtagcatcgacggtggtagtgccaaagtcgcaaccttcgccccaacagtcacag
tcccagttacccctgcaggcacccagatcaggaaaacgatactcagtgaatcgaaagacg
catcgaccggagccgtcagaggagggtcaaagggtggagtttgtggcgccgaccttgccg
gatgcagagatgcggcagttgtatcggtctgtcgatccctccattgtagccgcattagtg
cagcgacatcaaatggaaaatccggaggcttttgaggctgctaaagcggcgtctttatcc
atggtggaggaacggacgttgcgggttgtgaatagagagcccaagtccccgcagaagtgt
gagcacaatgaccctattcgaccagacggtgatacggcaactacaaacggagaatcgtag
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