Echinococcus granulosus (hydatid tapeworm): EGR_04403
Help
Entry
EGR_04403 CDS
T05553
Name
(RefSeq) Nuclear cap-binding protein subunit
KO
K12882
nuclear cap-binding protein subunit 1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013
Nucleocytoplasmic transport
egl03015
mRNA surveillance pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_04403
09122 Translation
03013 Nucleocytoplasmic transport
EGR_04403
03015 mRNA surveillance pathway
EGR_04403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_04403
03041 Spliceosome [BR:
egl03041
]
EGR_04403
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
EGR_04403
Spliceosome [BR:
egl03041
]
Common components
Common spliceosomal components
Cap binding complex
EGR_04403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
JAMP
Motif
Other DBs
NCBI-GeneID:
36340118
NCBI-ProteinID:
XP_024351973
UniProt:
W6UR31
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MSRKRHRDSSYDTDCSPAYFGLHPVDKFYPKRGRPDRDTIESLVYRIGSKATDKIHKDIS
ELCILFCAELDKNLEHRIKLITSCAKNIPERMQIYTTLLGLINLKNHDFVSRAVDAIVRD
LRDALKSSSFDDVKYLVRFLSNSVNCNIIHPASLLSLYENFAEVTLDVCSSSQARTDWYS
FVVLSALPYITPPDYDSEIVYPLPQVVFRMFDYTDVYCPDDDVAVDGEKARDVSKISPLN
SPTLPGAHTIERFLVDDQIHIILETMHFNRIMCARTLLNLQTRAKLALDYMIVEAIFADI
FRLPKPPVRHGNLLFYASLLIQLCNEAVNTIPLVLAQATGILFERLDSMKPVCIARFVEW
FSFHLTNYQLKWSWRDWSLALGEPVMSPRRWFISETLCRLVRYSYYENVKQRLPRSFYCL
LPPQPGPINPYDKASTAQRRIFIRVLEAFHQRHSSDDLLNLIRRLASQRGDDFDDSDLEP
YRQSRSRSRSGSSNHPHHSNSYSETEGSVEMDGRDQRSRPAAHRHLDGDKRGGSRSNSSA
SSASATSEKSRPVKNELTSSKRARNKEKMEDNEDDFDNCLVPGVTNRELELFMTALLYRA
HKTISHTCSLLNRYSEAFKTLASTVELQVEALHILQAVWCNQSQMVVAISDYMSRQGMLD
PESVVGWAFSPFMSAFCGPLAPPPSTVHVCPRMLQSHVWECLMHTLVRVGQRIAQITPRL
EAVKDQAGVHHRKSASGSRSDGSSSDLDNDYGDGDLRTKIVRVRRRHQRHCRVGSHGSSS
GGGGGTSPDRLARLKEERGEAVRSQCAVITLLLHRHVRLVATVEAKATEEMGAPDNPSDL
VDLASVAYWLKGRLMQTVLEHQDQLLPYMDNLEELMSDLTPFVGDVFQALRSLYT
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaagcggcatagggactcttcttacgataccgactgtagtcctgcgtatttt
ggcttacatcctgtagataaattttatccaaaacgtggacggcctgatcgcgacacaata
gagtcgcttgtatataggatcggaagcaaggctactgataagattcataaggacatcagt
gaactgtgcattctcttttgtgctgaactggataagaatcttgaacatcggattaagtta
attacttcgtgcgccaagaatattcccgagcgcatgcaaatttacacgacccttcttggg
ttgataaatctgaagaatcacgacttcgtttctagggccgttgatgccattgtcagagat
ttgagggacgctcttaaatctagctcttttgatgatgtgaaatatttggttcgattctta
tctaactcggtgaactgcaacattattcatccagccagtctgctatctctttatgagaat
ttcgcggaagttactttggatgtttgctcaagttcacaagcgcgaacggattggtattct
tttgttgttctttccgcactgccctatatcacaccaccggactatgattcagaaatagtc
tatcctctgcctcaagttgtatttcgcatgttcgactacacggatgtctactgcccagac
gacgatgtagcggtagatggtgaaaaggctcgggacgtatctaaaatctcacctttgaat
tcccccaccctgcctggtgcccacactatcgaaagatttttggtggatgaccagattcat
atcatcctcgaaacaatgcatttcaatcgcattatgtgtgctcgaactcttttgaaccta
caaacacgcgctaaattggctctcgactatatgatagtagaggccatatttgctgatatc
tttcgtctcccaaagccaccagtgcgccatggaaatctcctgttctacgcctctctcctc
attcaactctgcaacgaggctgtcaacaccatacctttagtgcttgcccaggctacgggg
atccttttcgagcgtctagatagtatgaagcctgtgtgcattgcgagattcgtggagtgg
ttttctttccacctcacaaactatcaattgaagtggagctggcgcgactggtctcttgcc
ctaggggagccggtgatgtcgcctcgacgatggttcatttccgagactctgtgtcgcctc
gtacgctactcttactacgagaacgtcaaacagcgccttccacgttctttctactgtctt
ttaccaccccaaccaggccctatcaatccctacgataaagcgtccacagctcagcggcgc
atcttcattcgtgttttggaagcattccaccagcgccacagttccgatgacttacttaat
cttatccgaagactcgcttctcagaggggtgacgattttgacgactccgatctagagccg
tatcgtcagtcacgaagtagaagcagaagtggaagcagcaatcatccccatcactccaac
tcctactccgaaacggagggttcagttgagatggatgggagggatcagcgttcgcgtccc
gctgctcatcgtcaccttgatggtgataagaggggtggatctcgttcgaactcaagcgca
tcctctgcctccgctacatccgagaagagtcgtcccgtaaaaaatgaattgacctcctcc
aaaagggcaagaaataaggagaaaatggaagataatgaggatgactttgataactgtttg
gtacctggtgtaactaatcgcgagctggagctcttcatgactgctctactttaccgtgct
cacaagactatcagccacacttgttccttactcaatcggtactcggaagcattcaagacg
ttggcgtcaacagtggaactgcaggtggaggctctgcacattctgcaagcagtgtggtgc
aaccagtcgcaaatggtggtggctatttcggactacatgtcgcgtcagggtatgctggat
cccgagtctgtggtggggtgggctttttcaccctttatgtccgccttctgcggccccctt
gctcctccaccctccactgttcacgtatgtcctcgaatgctgcagtcacatgtgtgggag
tgtctcatgcatacactggttcgagttggtcaacgcatcgcccaaatcacaccgagactg
gaagctgttaaggatcaagcaggcgtgcaccatcgtaagtccgcaagtggatcccgatct
gacggcagctccagtgacctagataacgactacggtgacggtgatctgcgcaccaaaatt
gtccgtgttcgccgtcgacaccaacggcattgtcgcgtcgggagccacggcagtagtagc
ggtggtggtggcggtacctcacctgaccgcctggcgcgtctgaaggaggagcgtggtgag
gcggtgcgttctcaatgtgcagtcatcacccttctgcttcaccgtcacgtccgtctcgta
gcaacggttgaagcgaaagcgacagaggagatgggggccccagacaacccgagtgatctt
gtcgatctggcatccgtggcctactggcttaagggacgccttatgcaaactgttctggag
catcaggatcaactgttaccatacatggacaatctggaggagctgatgtccgatttgaca
ccgttcgtgggtgacgtgtttcaggcattgcgaagcctctatacctga
DBGET
integrated database retrieval system
