Echinococcus granulosus (hydatid tapeworm): EGR_04444
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Entry
EGR_04444 CDS
T05553
Name
(RefSeq) Replication protein A DNA-binding subunit
KO
K07466
replication factor A1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03030
DNA replication
egl03420
Nucleotide excision repair
egl03430
Mismatch repair
egl03440
Homologous recombination
egl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGR_04444
03420 Nucleotide excision repair
EGR_04444
03430 Mismatch repair
EGR_04444
03440 Homologous recombination
EGR_04444
03460 Fanconi anemia pathway
EGR_04444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egl03000
]
EGR_04444
03032 DNA replication proteins [BR:
egl03032
]
EGR_04444
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_04444
Transcription factors [BR:
egl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EGR_04444
DNA replication proteins [BR:
egl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EGR_04444
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EGR_04444
MMR (mismatch excision repair)
EGR_04444
DSBR (double strand breaks repair)
HR (homologous recombination)
EGR_04444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
GDH2_N
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
36340159
NCBI-ProteinID:
XP_024351807
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVSLTSGAIDRINAGDSIKDPILKVVGYKNVPGSNAGQNRYRLLLSDGVKSHSFAMLATQ
LNHLVETGKLLNGSIIRLKKFVCNNVQKDKYVVIVLDVDIVGFEQQTPVQGRQPLNQVED
NSSVQSTASSLPDRNVASTPPRCINSPFASASPGTPGGRVFSIQSLNPYQSRWTIRARVS
QKGTIRTWQRSGREGKLFSFTLLDSTGEIRATAFNAEVDKFYDQIEVNKVYYISKASLKP
ANKQFNTTNNDYEMSLNSDTQIVPCEDGEDVSVPSFSFNFVPIGKLDGYQPGDFVDVVGV
VHESGDVSTITIRSSQREVQKREVGLVDDSGCLVRLTLWGQEAVDFDGTNHPALVVKSAK
LSDFNGRSLSTTTQSSVMIAPTSIPEANRLKGWYENGGGSTFNFEMYRGEIMGEVGGEGF
SGTLGSRDWNPLSDLEAPGVGGQAKPDLFTCKAVVTFLKKENFMYQACTTEGCQKKVLDL
GNGLYRCEKCNRETPNYKWRLLLSVKISDMTGEHWITCFQNTAEVILGRNAEELGAIKES
KDENQMDNVFVNAIFKSWIFRLRAKVDTFNDESRLRVVAIEAKPVSFADYGRQLQKQIEA
IIPTLPAELTMDDAMD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctcacatctggtgcgatagatcgaataaatgccggcgacagcataaaagat
ccaattcttaaagtcgtgggttataaaaatgtccccggtagtaatgccggacaaaatcgg
tatcgtctattgcttagcgatggtgttaagtctcattcatttgctatgcttgctacacaa
ttgaatcacctcgttgaaactggaaagctcttaaatggcagcattatacgcctaaagaaa
tttgtctgcaataatgttcagaaggacaaatacgttgtcattgttctcgatgtagacata
gtcggattcgagcagcaaacacctgttcaaggtcgtcaacccttaaatcaagttgaagac
aattcatctgtgcagtcgaccgcctcgtctttgccggatcggaatgttgcaagtactcca
ccgcggtgcattaattcaccttttgcatctgccagccctggcactcctggaggtcgtgtt
ttcagtattcagagcctcaatccctatcagagccgttggacgattcgcgcacgtgtctct
cagaaggggactattcgtacttggcagaggagtggtcgggaaggcaagcttttcagtttt
actcttctggattccactggagaaatccgagcaaccgctttcaacgccgaagtggacaag
ttttatgaccaaattgaggtcaataaggtctactacatcagtaaggcctcactgaaacct
gccaataagcagttcaatactacaaacaatgactatgaaatgtccctaaacagcgacact
caaatcgtgccctgtgaagacggtgaagacgtctccgtaccctccttctcgttcaacttt
gttcctattgggaagttggacggttatcaaccaggtgactttgttgacgtagtcggagtg
gtccacgagtctggcgatgtttctacgatcaccattaggtcatcccaacgagaagtacag
aaacgggaagtgggtctagtggacgattccggatgtcttgtgcgcctcactctttggggt
caggaggcagtcgattttgatggtacaaatcaccctgcattagtggttaaatcggcaaaa
ctgagtgacttcaatgggagatcgttgagcaccacaacgcagtcctctgtgatgattgca
ccgactagtatcccagaggcgaatcgattgaaaggttggtatgagaatggaggaggcagt
acgttcaacttcgagatgtatcgcggagagattatgggtgaggttggtggcgagggcttc
agtggtacactgggctcgcgggactggaaccctctgtctgatcttgaggcgcccggagtg
gggggtcaggctaagccggacctcttcacctgtaaggcggtggtgaccttcctgaagaag
gagaacttcatgtaccaagcgtgcaccactgagggctgtcagaagaaggttttagacttg
ggcaatggactgtatcgctgtgagaagtgcaaccgcgagacacccaactacaagtggaga
cttttgctttcagtcaaaatctccgatatgacgggtgagcattggattacgtgtttccaa
aacacggctgaagtcattcttggtcgaaatgctgaggaattgggcgctattaaggagtct
aaggatgagaatcagatggacaatgtctttgtcaatgccattttcaaatcctggatcttt
cgactccgcgccaaagtggacacctttaacgatgagtcgaggttacgagtcgtggctatt
gaagcaaagccggtatcctttgcggactacggtaggcagctgcagaagcagatcgaggcc
atcatcccaactcttcctgctgagttgacaatggatgatgcaatggactga
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