Echinococcus granulosus (hydatid tapeworm): EGR_04593
Help
Entry
EGR_04593 CDS
T05553
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03020
RNA polymerase
egl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EGR_04593
09124 Replication and repair
03420 Nucleotide excision repair
EGR_04593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_04593
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_04593
Enzymes [BR:
egl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EGR_04593
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EGR_04593
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EGR_04593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
36340308
NCBI-ProteinID:
XP_024351770
UniProt:
W6V3G5
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MTFCLHRSHLKALNMSDLYYTEEGIEELQDDDIEDIPLQLNVQDGDDDEITPDLWQEACW
LVISSYFDEKGLVRQQLDSFDEFIQTSVQKIVEDSPVIEFQAEAQYTGGIIEKPIYLSKA
THWEKDGSSAPMTPNDARLRNLTYAAPLYVDVVKKVTRDGYVDEKKFEKKFIGKIPIMLR
SSYCILAVMSDRDLAELNECPLDPGGYFIINGSEKVLIAQEKMATNTGSYPFFCLTTLVY
VFQQKDSKYAYKTEIRSCLEHSSRPASTLWVNMMARGGKDNNKRATIGQRIVAILPYIKQ
EIPVLIVFRALGFVADRDILEHIIYDFEDSEMREMIKPSLDEAFVIQDQKVALNFIGSRG
ARPGVTKEKRIKYAKEILQKETLPHVGISDYCDTRKAFFLGYMVHRLLLTALKRRDVDDR
DHYGNKRLDLAGPLLAFLFRGLFRNLTKEIRLYAQKFIDKGKEFNLENAIRSQIITDGLK
YSLATGNWGDQKKANQARPGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLARPRQLHNTL
WGMICPAETPEGSAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEIAPSAIGKTC
KIFVNGCWVGIHNSPDHLMVTLRKLRRQVDVIVSEVSMVRDYRDQEIRIYTDAGRICRPL
VIVEKGKLMLKRTHIDQLKNRAYNRFCWQELVLYGVVEYIDILEEETAMIAMGPAEMQAA
VNYCKTHTHCEIHPSMILGICASIIPFCDHNQSPRNTYQSAMGKQAMGVYISNFHTRMDT
LANVLYYPQKPLVTTRSMEYLRFRELPAGINAIVAIACYTGYNQEDSLIVNESAIQRGFF
RSEFYRTYKDQEARHGMDQEEVFEKPNPQTCRGMRHAIYDKLDDDGLIAPGTRVSGDDVL
IGKTISLPENEDELDGGQRRYTKRDASVFMRRSEYGIVDQVMVTWNNEGNKFCKVRVRTT
KTPQVGDKFASRHGQKGTCGILYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQ
GKVSANKGEIGDATPFNDAVNVRKISLLLQEYGYQHTGNEIMYNGFTGRKLNSQIFLGPT
YYQRLKHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRER
LFFASDPYQVYVCNLCGLMAIAHQRNKTFECSTCQNTTQISQVALPYACKLLFQELMSMS
IAPRMMVNANSTPF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttgtttacatcggtcacacctaaaggctctaaacatgtctgatttgtattat
acagaagagggcattgaggagcttcaagatgatgacatagaagatatccctctgcaatta
aacgtgcaagatggagatgacgatgaaataaccccagatttatggcaagaggcttgttgg
cttgttatcagcagttatttcgatgagaagggtttggttcgacaacagttggattctttt
gatgaattcattcaaacatctgttcagaaaattgttgaagactcccctgttatagaattc
caggcagaagcccagtatacaggtggaataattgaaaagccgatttaccttagtaaagcg
acgcattgggagaaggatggttcctctgctcccatgaccccgaacgatgcgcgacttcga
aatctgacctatgctgcccccctatatgttgacgttgtcaagaaagtcaccagagacggc
tacgtagatgaaaagaaattcgaaaagaagtttattggcaaaattcccatcatgttgaga
tcgagttattgtattctggctgttatgagcgaccgtgatttggcagaacttaatgaatgt
ccgcttgaccctggtggctacttcattataaatggttctgaaaaagttttgatagctcaa
gagaagatggctacaaatacaggtagttacccatttttctgtcttacgactttagtttat
gtatttcaacaaaaggacagcaaatacgcctacaaaactgaaattcgatcctgccttgag
cacagttctcgtccagctagcacgctttgggttaacatgatggcgcgtggtggtaaagac
aacaataagcgcgcaaccatcggtcaacgtattgtcgctattctcccttatattaaacag
gagatacctgttctgattgtctttcgggctcttggctttgtggccgatcgcgacattttg
gaacacatcatctacgactttgaggatagtgaaatgcgtgaaatgataaagccgtccctc
gacgaggctttcgttatccaagatcagaaggttgcacttaactttatcggttcacgtggt
gctcggccgggtgtcacaaaggaaaagcgtatcaagtatgccaaggagatattgcaaaag
gaaacacttcctcatgttggcatctctgactactgcgatactcgcaaggccttctttttg
ggctacatggtgcaccgtctccttctcacggcgcttaaacggcgcgatgttgacgatagg
gatcactatggaaacaaacgactggatcttgcgggtcctctactcgcttttctctttcgt
ggactattccgtaacttgaccaaagaaatcagactatatgctcaaaagtttatcgacaag
ggaaaggaattcaatcttgaaaacgccattcgtagtcaaatcataacagatggcttaaag
tactcccttgctacgggcaactggggagaccagaagaaggctaatcaagctagaccgggt
gtttctcaggttcttaatcgactcacttttgcctccaccctgtcgcatcttcgacgcttg
aattccccaatcggcagagatggaaagttggcgagaccacgtcagttacacaacactctg
tggggcatgatttgtccagccgaaactcccgagggttccgccgttggtttggttaagaat
ttggctctcatggcgtacatatccgttgggagtcagccgtcaccaattctggaatttctt
gaggagtggagtatggagaacctggaagagatcgccccctctgcgattgggaagacctgt
aaaatcttcgtcaacggctgctgggtcggaatacacaactctccggatcaccttatggtc
acgctgcggaaacttcgacgccaggtggatgttattgtgagtgaggtcagcatggtcaga
gattatcgcgatcaggagatccgaatttacaccgatgctggtcgcatctgccgcccgctt
gttattgtcgagaagggcaagctcatgctcaaacggactcacatcgatcagctaaagaat
agggcctataaccgcttttgctggcaggagcttgtactctacggtgtagtggaatatatt
gacattttggaggaggagacagccatgattgctatgggtccagctgaaatgcaggccgca
gtaaattactgtaaaactcacactcactgcgaaattcatccaagcatgattctgggcatc
tgtgccagcatcattcccttctgcgatcacaaccaatctccgcgtaacacctaccaaagc
gcaatgggcaaacaggccatgggtgtgtacatctctaacttccacactcgtatggacact
ctcgccaacgtactctactaccctcagaagcctctcgttactacacgctccatggagtat
ttgcgattccgagagctgccagccggcatcaatgccattgtcgccatcgcctgctacact
gggtataatcaggaggactcgctgattgttaacgaaagtgccattcagcgtggcttcttc
cgatcggagttctaccgaacttacaaggaccaggaggcaagacatgggatggatcaagaa
gaggtcttcgagaaaccaaatccacaaacttgccggggcatgcgccacgccatctacgat
aaactagacgatgatggtcttatcgcacccggcactcgtgtttctggggatgatgtgctt
attggaaagactatttccctaccggaaaatgaagatgagctggatggcggtcaaaggcgc
tacacgaaacgcgatgcctcggtatttatgcgccgcagcgagtacggtattgtggaccag
gtaatggtcacctggaacaacgaaggaaataagttttgcaaagtgcgtgtgcgcaccaca
aagactccacaagttggtgacaagtttgcctcgcgtcacggtcaaaaaggtacctgcggc
atcctctaccgacaggaggatatgcccttcacttgtgagggcatcactcccgacattatt
atcaatcctcacgccattcccagtcgaatgacaattggtcacctgatagagtgtcttcaa
ggcaaagtcagcgcgaataagggtgagattggcgatgccactcccttcaatgatgctgtg
aacgtacggaagatctccctcctcctgcaggagtatgggtaccaacacacaggcaacgag
atcatgtacaatggtttcacaggtcgtaagctcaactcccagatcttcctgggtcccacg
tactatcagcgtttgaagcacatggtcgacgacaagattcactcgcgctcgcgtggaccc
gtccaaattctcaaccgtcagcccatggagggccgaagtcgcgacggtggcttacggttc
ggtgaaatggaacgtgactgccagatcgcccacggtgcagcccaatttctccgggagcgc
ctcttctttgctagcgatccctatcaagtttatgtgtgcaatctgtgcggactgatggct
atcgcacatcaacgcaacaagactttcgaatgtagtacttgccagaacaccacacagata
tctcaagtggctttaccgtatgcctgcaagcttctcttccaagagctcatgtccatgtcc
atcgcaccgcgcatgatggtgaatgcgaattctacccccttctaa
DBGET
integrated database retrieval system
