Echinococcus granulosus (hydatid tapeworm): EGR_05260
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Entry
EGR_05260 CDS
T05553
Name
(RefSeq) Pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egl03041
]
EGR_05260
Spliceosome [BR:
egl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EGR_05260
Complex C
U5 SnRNP specific factors
EGR_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
36340975
NCBI-ProteinID:
XP_024351130
UniProt:
W6V239
LinkDB
All DBs
Position
Unknown
AA seq
2317 aa
AA seq
DB search
MLPANKALEWQQLQSKKYADKRKFGFVEAQKEDMPPEHIRKIVRDHGDMTNRKFRHDKRV
YLGALKYMPHAILKLLENMPMPWEQIRDVLYHITGAITFVNEIPWVVEPIYVAQWSSMWI
MMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQMDLDPEEDGAIAEWFYD
RNPLAETPHVNGLTYRHWNLPLPIMSNLYRLANCLLTDLVDDNYFYLFDLKSFFTAKALN
VALPGGPKFEPLVKDKNLDDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNSYPFQVHLS
WYHTPNVLFIKTEDPDLPAFYFDPLINPISQRHTVKVPEAHIAGFDEDEGGFSLPEHYRP
FMAETPLYTDNTANGIGLLWAPRPFNLRSGCTRRALDVPLVQTWYREHCPSGMPVKVRVS
YQKLLKYFVLNALHHRKPKPQRKRYLFRSFKATKFFQATTLDWVEVGLQVCRQGYNMLNL
LIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYRL
GNVDAYQLADGLQYIFSHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPG
VGMWAPAWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHYDLELR
AAVMHDIIDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPNMPIPIENMILRYVKAK
ADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYVTPEEA
VAIYTTTVHWLESRRFSPIPFPPVSYKHDTKLLILALERLRESYSVKNRLNQSQREELGL
IEQAYDSPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYL
WYEADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLKDVWETSEGECNVLLETRFEKVYE
KVDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHINSYGIIRGLQFASFIMQYYGL
VLDLLVVGLERSSEMAGSPQMPNDFLQYQDTATEVAHPIRLYTRYVDRFWMFLRFSAEEA
RDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVT
TIDWESSFVSVYSKDNPNLLFAMCGFECRIRPACRAPSQASDVNLPGGVWHLQNEVTKER
TAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAASSTVPL
LDLLVKCENKIQTRIKIGLNSKMPARFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSK
QTDVGITHFRSGMSHDEDQVIPTLFSYIQTWETEFRDSQSVWAEYALKRQEANAQNRRLT
LEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKQYQVLKQNPFWWTHQRHDGKL
WNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRS
GLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQK
IHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWPVSRPSL
LADSKDVMDGTTTQKYWIDVQLRWGDYDSHDVERYCRAKFLDYTTDTMSIYPSPTGVMIA
IDLAYNLHSAYGNWFPGCKPLIQQAMLKIMKANPALYVLRERIRKALQLYSSEPTEPYLS
SQNYNELFSNQTIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT
SVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI
KGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKSISSYTAFSRLILILRALH
VNNDKAKVTLKPDKTTITEPHHIWPTLTPEEWIKVEYQLKDLILADYGKKNNVNVASLTQ
SEIRDIILGMEISAPSQQRQQIAEIEKAAKDQAQLTATTTKTVNKHGEEIISTTTSNYEK
QHFSSKTEWRVRAISATNLYLRTNNIYVSSDDIKENGYTYILPKNVLKKFITISDLRAQI
CGYLYGISPPDNNQIKEIRCIVMPPQWGTHQTVHVPEGLPQDEYLREMEPLGWIHTQPNE
LPQLSPQDVTTHAKLFAEHDGERTIVITCSFTPGSVSLCAYKLTPGGYEWGRQNTDKGNN
PKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHNPNMKYELQPLKPKKFYHR
IHRPSHFLDFTNVEESESFAADRFVWWLGSDTKDWEY
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagcgaataaggcgctggagtggcagcaattgcaatcgaagaagtatgcggac
aagcgaaagtttggttttgtggaggcgcagaaggaggacatgcctcctgaacacatccgc
aaaatcgttcgtgatcatggtgatatgaccaatcgcaagtttcgccatgataaacgtgtt
tatctgggagcgctcaagtatatgccgcatgccatcttgaagctcctagagaacatgccg
atgccttgggagcagataagagatgtcttgtatcacatcacgggagctattaccttcgtg
aacgaaataccttgggttgtcgagccgatctacgtcgcccagtggagctccatgtggatt
atgatgcgtcgcgaaaagcgagatcgacgacactttaagcgaatgcgcttccctcctttc
gatgatgaagaaccaccactagactacgctgataatattcttgacgttgaacctctagaa
ccgatccaaatggatcttgatcccgaagaggatggcgctattgctgagtggttctatgat
cggaatcctctcgctgaaactccgcacgtgaatggtcttacgtatcgacattggaatttg
ccactgccgataatgtcgaatttatatcgtctagccaactgtcttttgacggatcttgtg
gatgataactacttttatctcttcgacctcaagtcgtttttcaccgcaaaagctcttaac
gtggctctaccaggtggtccaaagtttgaaccattggtgaaggacaaaaaccttgatgac
gaggactggaatgaattcaacgacattaataagattataatccgccagcccattcgcacg
gagtatcgaattgcctttccctacctgtataatagttatccctttcaagttcacctgtca
tggtaccatacaccaaacgttcttttcataaagactgaagatcccgatctcccggccttc
tactttgatcctctcattaacccaatttcacaacgtcacactgtaaaggttccagaggct
catattgcaggcttcgacgaggatgaggggggattcagccttccagagcactacagaccc
tttatggctgagacacctttgtacacagacaacacggccaatggtatcggcctcctctgg
gcacccagacccttcaatcttaggtctggttgcacccgacgcgctcttgacgttccattg
gttcaaacttggtatcgagaacactgtccctctggaatgccagtgaaggttcgtgtatcc
taccaaaagctgctgaagtacttcgtgctcaacgccctacatcacaggaagccaaaacca
cagcggaagcgctatctcttccgctcgttcaaggctactaagttcttccaagccaccacg
cttgattgggtggaggtgggcctccaagtttgtcgtcagggctacaacatgctgaatctg
ctgatccatcgaaagaaccttaattatcttcacctagactacaacttcaacctaaaacca
gttaagactttgaccacgaaggagcgcaaaaagtcgcgtttcggcaatgccttccatctt
tgccgcgagatccttcgtttgaccaagctcgtggtcgatagccacgtgcagtatcgtctg
ggcaatgtggatgcctatcagctcgctgatggcctccaatacatcttctcccatgtcggc
caactcacgggcatgtaccgttacaagtacaaactcatgcgacaaatccgtatgtgcaaa
gacctaaaacacttaatctattatcgattcaacaccggtccagtgggtaaaggtcccggg
gtcggtatgtgggcgccagcgtggcgcgtctggctcttcttcatgcgcggaatcaccccg
cttttggagcggtggctaggcaaccttctatcccgacagttcgagggacgtcactctaag
ggagtggctaagactgtcactaagcagcgtgtggagtcacattatgatttggaattgcgt
gctgctgtcatgcacgatatcatcgacatgatgcccgagggtattaagcagaacaaagcg
agaaccattctacagcacctgagtgaagcctggcgttgttggaaggccaacataccttgg
aaggtgcctaatatgcccatccccatcgaaaatatgattttgcgttacgtgaaagctaag
gcagattggtggacaaacacagctcattacaaccgcgagcgtattcgtcgtggagccacg
gtagataaaacagtttgcaaaaagaacctgggtcgtctcactcgcctctacctaaaagcg
gagcaagaaaggcagcataattacctcaaggacggtccctatgtcacgcctgaggaggcg
gtggctatctacaccacgacagtgcattggctagagagtcgtcgtttctcccccattcct
ttccctccagtaagctacaagcatgacacaaagttgttgattctagccctggagcgactg
cgtgaatcatactccgtgaagaaccgtttaaaccaatcgcagcgtgaggaattgggtcta
attgagcaggcctatgatagcccacacgaggcgttaagtcgaatcaagcgtcatctgttg
acacaacgagcttttaaagaggtgggaatcgagtttatggacctctacagccaccttgta
ccagtttacgacgttgaaccattggaaaagatcacagacgcttatcttgaccagtattta
tggtatgaagcggataagcgaaggctcttcccaccttggatcaagcctgcggattctgaa
cccccgccacttctggtctataagtggtgtcagggcattaacaacctaaaggatgtgtgg
gagacgagtgagggtgagtgcaacgtgctgcttgagacgcgtttcgagaaggtctacgag
aaggtcgatctcaccttgctcaatcgtctgctgcgcctcatcgttgatcacaacattgct
gactatatgacagcgaagaataacgttgtgatcaattacaaggacatgaaccacattaat
agctacggcatcatccgtggtcttcagtttgcctctttcatcatgcagtactatggtttg
gttctcgatctccttgttgtcggtctggaacgttcctccgagatggctggatccccacaa
atgcccaacgactttttgcagtaccaggacaccgccaccgaggtcgctcaccccatccgt
ctctacacacgttacgtggaccgcttttggatgtttctgcgcttcagtgccgaggaggcg
cgtgatcttatccagcgctacctcactgagcatcctgatcccaacaacgaaaacattgtg
ggctacaataataagaaatgctggccccgggactcgcggatgcggctgatgaagcacgat
gtcaacctgggtcgagcggtgttctgggacattaagaaccgtctgccacgctctgtcacc
acgattgattgggaaagctcctttgtgtcagtctactcgaaggacaatcccaatctttta
tttgcgatgtgtggctttgagtgtcgtatccgaccggcatgtagagctcctagccaggct
tctgacgtgaatctgccgggtggagtatggcatctgcaaaatgaggtgacgaaggagcgc
actgcccaatgcttccttcgtgtggatgacgagtcgatgcaacgattccacaatcgcgta
cgccagatcctcatggcctcgggctcaacgacttttacgaagatcgtgaacaagtggaac
accgcccttattggtctcatgacatactttcgcgaggccgccagttccactgtgccactg
ctcgacctgttggtgaagtgcgagaataaaatccagacccgcattaaaattggcctcaat
tcaaagatgccggctcgtttcccacctgttgtcttctatactcccaaggagctaggtggt
ctaggcatgctgagcatgggtcacgtgctcatccctcaatctgacttgcgatggtcgaaa
cagacggacgtgggtatcacccacttccgctcaggcatgagccacgatgaggaccaagtg
attcccactctcttctcctacatccagacctgggaaaccgagttccgtgactcccagtca
gtgtgggctgaatacgcactcaaacgccaggaggccaacgcgcaaaatagacgtttgact
ctggaagacctggaagacagctgggatcggggtattccgcgaatcaacaccctctttcag
aaggaccggcataccctggcctacgacaaaggttggcgcgttcgaacggaattcaagcag
tatcaggtgctgaagcagaaccctttctggtggacacatcagcgccacgatggtaagctg
tggaatctcaacaactaccgcaccgacatgatccaggccctgggcggtgtggagggaatt
ttggagcataccctcttcaagggcacatacttccccacctgggagggtctcttttgggag
aaggcgagtggtttcgaagagtcgatgaagtacaagaagctgacgaacgcccagcgctcc
ggtctaaaccagattccaaatcgtcgattcacgttgtggtggtcacccaccattaatcgt
gctaatgtgtacgtaggtttccaagtacagttggatttgactggaatcttcatgcatggc
aaaattcccacgctgaagatttctctcattcaaatcttccgcgcccacttgtggcagaag
atccacgagtcggtggtgatggacctctgccaggtcttcgatcaggagctcgacgctctc
gagattgagacggtgcagaaggagaccatccacccgcgcaagtcctacaaaatgaactcc
agctgcgctgacatcctcctcttcgcctcgtacaagtggcctgtctctcgacccagtctt
ttagccgactcaaaggacgtgatggacggcaccacgacgcaaaagtactggattgatgtg
cagctacgttggggcgattacgactcacacgacgtggaacgctactgcagagccaaattc
ctcgactacaccaccgacactatgtctatctacccctcacccaccggcgtaatgattgcc
attgacctagcctacaaccttcacagcgcttacggcaactggttcccaggctgcaagccg
ctcattcaacaggctatgctgaagattatgaaggctaatcctgcgctctacgtgttgcgt
gaacgcattcgcaaggctctgcagctctactccagcgagcccacggagccctaccttagc
tcgcaaaattacaatgagctcttctctaaccagactatctggtttgtggatgacaccaac
gtctatcgcgtcaccatacacaagacattcgagggtaatctcaccaccaagcccataaac
ggtgcgattttcattttcaatccacggacgggtcagctcttcctgaagattatccacacc
tccgtgtgggcgggtcagaaacgtctgggtcaattggccaaatggaagacggccgaagag
gtggccgcgctcatccgttctctgcctgtagaagaacagcccaagcagatcatcgtcaca
cgcaagggcatgctcgaccccttggaggtccacctcctcgacttccctaacattgtcatc
aagggatcggagctacagctgcccttccaggcctgtttgaaggtggagaagtttggtgat
ctcattctcaaggcgacggagccgcagatggtcctatttaacctttatgatgactggctc
aagtctattagctcctataccgccttttcgcgtctaatcctcatccttcgcgccctccat
gtgaacaacgacaaggcgaaagtgactttgaagccagacaaaaccaccatcactgagcca
catcacatctggcccacgcttactcctgaggagtggatcaaggtggagtatcagctgaag
gatctcattctcgctgactacgggaaaaagaacaatgtaaacgtcgcctcgctgacccag
tcggagatccgcgatatcatcctgggtatggagatctcggctccgtcacagcagcgacag
cagatagcagagattgagaaggcggcgaaggaccaggcgcaactcaccgccaccactacg
aaaacggtgaacaagcacggggaagagatcatctccaccactacctccaattacgagaag
cagcacttcagcagcaaaacggagtggcgagtgcgcgccatctctgctactaatctctat
cttcgcaccaacaacatctacgtcagctccgatgacattaaagagaacgggtatacctac
atcttgcccaagaatgtccttaagaagttcatcaccatttctgatctacgagctcagatc
tgtggctatctctatggcatctcaccaccagacaataatcaaatcaaggagattcgttgc
atcgtgatgccaccgcagtggggcactcaccagacagttcacgttcctgagggccttccc
caagatgagtaccttcgcgaaatggaacctcttggatggatccacactcagcccaacgaa
ctgcctcagctatcacctcaggatgtgacaacacacgcaaagttattcgcagagcacgat
ggtgagcggaccatagtgatcacctgcagttttacaccgggctcagtgtccctttgcgcc
tacaaactaaccccgggtgggtacgagtggggtcgccagaacaccgacaaggggaacaat
cccaagggctatctgcccagccattacgaacgcgttcagatgctcctctccgatcgcttc
ctcggtttcttcatggtgcctgcgcagggctcctggaactacaatttcatgggtgtgcgt
cacaatccgaatatgaagtacgaactccagccgttgaagccgaagaagttttaccaccgc
attcaccgaccctcacacttcctcgacttcaccaacgtagaggagagcgagtcattcgcc
gcggatcgatttgtgtggtggcttggtagcgataccaaggactgggagtattag
DBGET
integrated database retrieval system
