Echinococcus granulosus (hydatid tapeworm): EGR_05343
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Entry
EGR_05343 CDS
T05553
Name
(RefSeq) Replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03030
DNA replication
egl03410
Base excision repair
egl03420
Nucleotide excision repair
egl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGR_05343
03410 Base excision repair
EGR_05343
03420 Nucleotide excision repair
EGR_05343
03430 Mismatch repair
EGR_05343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egl03032
]
EGR_05343
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_05343
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_05343
DNA replication proteins [BR:
egl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EGR_05343
DNA Replication Termination Factors
ELG1-RFC complex
EGR_05343
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EGR_05343
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EGR_05343
Check point factors
HRAD17(Rad24)-RFC complex
EGR_05343
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Viral_helicase1
AAA_22
AAA_14
Rad17
RCF1-5-like_lid
nSTAND_NTPase5
AAA_lid_RFC1
AAA_16
AAA_11
nSTAND3
DEAD
AAA_18
Mg_chelatase
ATPase_2
RuvB_N
ABC_tran
AAA_19
RNA_helicase
AAA_assoc_2
AAA_5
AAA_25
MeaB
DNAX_ATPase_lid
AAA_28
AAA_24
AAA_23
AAA_30
MipZ
NTPase_1
IstB_IS21
SRPRB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
36341058
NCBI-ProteinID:
XP_024351063
UniProt:
W6UNK6
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MSSVLPQKVQDGSNMTSFQKSSIPKLDVPWIEKYRPLRLSDIVGNEATIQRLESFSHTGN
VPHIIIAGPPGCGKTTSILCLARALLGDAYKDAVLELNASNDRGIDVVRSRIKMFAQKKV
TLPFGRQKFIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNDSSKLIEPIQSRCAVL
RYAKLTSVQLMARLFEVAKAEGVNYTEEGLEAVVFTAEGDMRQALNNLQSTYQGFGMVTS
ENVFKVCDEPHPLLVQNMVDHCLRGKFSDAHNVLKHLWDLGYSAEDIYSMLFRIVKNHQM
DEYLKLEYIKEVGLTHLRIAEGLGTLLQLGGLLARLCKITIQTGR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgttcttccacaaaaggtgcaggacggatcaaatatgacatctttccagaaa
tcatcaatcccgaaattagacgttccatggatagagaaatatcgtcctctccgcctctcc
gacattgttgggaacgaagccacgatccaacggcttgaatccttctctcatacgggcaat
gtgccccacataattattgctggcccacccggctgcggcaagaccaccagcattctctgt
ttggctcgggctcttcttggcgacgcttacaaagacgccgttcttgaactcaatgcgtcc
aacgatcgtggcatcgacgtcgtccgtagtcggattaagatgtttgctcagaagaaggtc
acactacccttcgggcgtcaaaaattcatcattcttgacgaagccgacagcatgacggac
ggggctcagcaggctctgcgtcgtaccatggagatttattcaaaaaccactcggtttgcg
ttggcgtgcaacgactcttccaagctgattgaacccatccagtcgcgatgtgctgtgctg
cgctacgcgaagcttacctcggtccaactgatggcacgactttttgaggttgcgaaggca
gagggcgtcaattacacggaggaagggctagaggccgtcgtctttaccgctgagggcgac
atgcgacaggcgctcaacaatctacaatcgacttaccaagggttcgggatggtcaccagc
gagaatgttttcaaggtatgtgacgaacctcatccgctgctggtgcagaacatggttgat
cactgcttaagaggcaaattttccgacgcccacaatgtcctgaagcatctttgggatctg
ggatactccgccgaagatatttactcaatgctcttccgcattgtaaaaaaccaccaaatg
gatgagtatctgaaactggagtacataaaggaagttggtcttacccatctcaggatcgcc
gagggtctgggcacgcttcttcaactcggcggtttactggcccggctctgcaaaattact
attcaaacaggaagatag
DBGET
integrated database retrieval system
