KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_05387
Entry
EGR_05387         CDS       T05553                                 
Name
(RefSeq) Cleavage stimulation factor subunit
  KO
K14406  cleavage stimulation factor subunit 1
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EGR_05387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egl03019]
    EGR_05387
Messenger RNA biogenesis [BR:egl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     EGR_05387
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st CSTF1_dimer WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_EIPR1 eIF2A WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_WDR19_1st B-prop_COPA_B_2nd Beta-prop_NWD2_C Beta-prop_RSE1_2nd Ge1_WD40 Beta-prop_HPS5 Cytochrom_D1 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 36341102
NCBI-ProteinID: XP_024350963
UniProt: U6JMC6
LinkDB
Position
Unknown
AA seq 429 aa
MSIRERDVLYRLIISQLFHDGYQAIAINLMNEVSPTISCGPSARLLKLVKLGLSIADDEQ
DRSVALEGDNIAPGTGIDLEIESESSTMAPEAALYETCYVTAHKAACRAAAFNSTGQLIA
TGSHDSSIKILDVERMLAKGNSGPEHSAQETPQQQMEAHPVIRTLYDHTAEVTCVDFHPD
ASQQILVSGSKDYTIKFFDFSNPSVKKAQRSIPEASPIKTLHFHPSGNYLLVGTHHKTLR
IYSVNTCQCFVSAVPEDQHNGAVTMARWAPNANYFVTSSVDGSFKIWDGVSGRCVSTFEA
AHDGLPVCSAVFSRNSKYVLTSGKDSVVKLWELSTSRCLISYTGAGTLGLHTHRSNAVFN
HTEDYVLFPDEVTKSLCCWDSRNADRQRLLPLSHNGPIRCFVHSPTTAAFLSCSDDNRAR
FWYKRPISD
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtctataagagaacgtgatgtactctaccgacttataataagtcaacttttccacgac
ggctatcaggctattgcaattaatcttatgaatgaagtatccccaactatttcatgcggt
ccatcagcgcgactcctgaaactagtaaagcttggtctctctattgcagatgatgagcaa
gatcggtcggttgcactcgagggtgacaacattgccccaggcaccggcatcgacctggag
attgaaagtgaaagttctaccatggctcccgaagctgcactttatgaaacctgctatgtc
accgcacacaaggcagcttgcagagcggctgcatttaatagcacaggtcaactcattgcc
actggttctcatgactcctcgattaagattctggatgttgaaagaatgcttgcaaaaggc
aactctggaccggaacactcggctcaggaaacgccacagcagcagatggaagctcatcca
gtcatccgaactctctacgatcatactgcggaagtcacctgtgtggattttcatcccgac
gcgtcacagcagattttggtgagtgggagcaaagactacaccatcaagttcttcgatttc
tccaatccctctgtgaaaaaggcgcagcgcagtattccggaggcgtcacccatcaaaacc
cttcacttccatccctcgggcaactacctcctcgttggtactcatcacaagactctgcgt
atttacagtgtgaacacttgtcagtgctttgtatcagcggtgccggaggatcagcacaac
ggtgcggtgacgatggcaagatgggcgcccaatgccaattactttgtcacctcttcggtc
gacggcagcttcaagatttgggacggtgtttcaggacgctgtgtctccactttcgaggcg
gcacacgacggtctgcctgtctgttcggcagttttctcgcgcaactcaaagtacgtgctt
acgtcgggaaaggacagcgtggtgaaactgtgggagctctcgacaagtcgttgtctcatt
agctacactggtgccgggactttgggactgcatacccatcgctccaacgctgtgttcaac
cacaccgaggattacgtccttttcccggatgaggtgaccaaaagtctgtgctgctgggat
tcgcgcaatgctgatcgccaacgtctgctgccacttagtcataacggtccgatccggtgt
ttcgtgcattcaccaaccacagcggcctttctctcctgcagcgatgacaatcgcgcgcga
ttctggtacaaacgacccatatctgactag

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