Echinococcus granulosus (hydatid tapeworm): EGR_05500
Help
Entry
EGR_05500 CDS
T05553
Name
(RefSeq) Chromodomain-helicase-DNA-binding protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_05500
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_05500
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EGR_05500
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
EGR_05500
SLIK complex
EGR_05500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CDH1_2_SANT_HL1
ResIII
CHD1-like_C
HDA2-3
DUF6511
DEAD
Cdh1_DBD_1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
36341215
NCBI-ProteinID:
XP_024350797
UniProt:
W6UFE6
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MAKVSAGSIAGDDLGDERVLKKSSRGARLEVMPIGFIVSVAILDTLPFRFLIQVSLNLSV
VCACLMVDESRHQQRRYGRLSESSRSDDADDIPNQVESFGQNSYGCKPEKSRKQNIRELR
DDFDYDPELYGIRRSERGRKATRLEVDHDDSSGSQSPVGRGSDPSESESEEDESSSESSS
DRRPYRVNTSRFSGRTRGCRVNYTSAFKDASESEDEASYRPQNGSSTDNRTHRGPAAASL
NRNQHALPQKPRGPLIRMSGKAPERYFNPEVAKQADTSDAESYAPHHGQSSNESSVEDPR
PVQVAYTADEAVQQEVDVIEEVLSQAVRRIGATGNSTTLYNSRLEKDPNEGFDPAKEKGE
IQYLIKWRSWSHIHSTWETEASLTSPDRGFPVDGMKRLYAYQSMIEERKAHEEVASRDEL
EAMLYEDERNELILSEKMEVDRIVAHSRDKKKGTVDYLCKWRRLDYRFCTWECGQVIDYL
FPEAIEAYHRRCSSTTLPNSRNVALTDRPRFARILEQPSYIGGGSPDLQLRDYQLKGLNW
IAHAWTRGNSVILADEMGLGKTVQAVSFLSYLFHEYGIYGPFLIVVPLSTISSWQKEIEL
WSPGLNLVVYVGDHISRQFIREHEWSRAAGVGGRRQQMLKFNICMTTYEILLKDRSWLGQ
VSWAALVVDEAHRLKNDASQLYKALFAFDTNTRLLITGTPLQNSLKELWSLLHFLMPRHF
DDWEEFEDNYSLQGQASSSAGYEAITRLHRTIEPFLLRRVKKDVEQSLPAKTERILRVEM
SKKQATLYRLILTRNYDGLMKVTHGHKTSFINIMMELKKCCNHANLIAPLAGEDQFQSNG
EALRDLIRGSGKLMLLDKLLQRLRPQGHRVLIFSQMVRMLDIIAEYLQFRGWGFQRLDGS
IRGELRKQALDHFNADGSTDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDIQAQAR
AHRIGQTKQVSVYRLVVKDSVEEKIIESATRKMLLDHLVIQRMDSAGNRGGGSARKSDAK
GQILTEILRHGAESIFKQNDEETAEVEVDIDDILNRAETRDADVEEDPYNPANVLLSTFN
VVTFDQSEQEDAKPVHIDSSGKSAKSWSEIIPEEMRENLKQAESQEALLDLELGPRRRKQ
VRTFQAGLDNDNYSSSSPSGSDRNGKRLIRLSDKEVRALVRAMKRFARPLERIEAIAAEA
ELPSRTNDEVREVVETIINGCKAAIESAPEEEDNLKQKGPMYYYGKVAIASKTLLLSLSH
LEILHKVLPKTSKEDRLNYDLPFPTRDVNWSTPWSSTDDAHLLVGVYEHGYDNWEAIKLD
SDLGLGSKLLPLAANERPQASHVRARVEYLLKALKKHCAKDSCEDSQKGALRRRHNKSSK
EHKKKHSKRLSGYAHSKESSRSSVKPKSAEFVESDDSSSGSDGGAGDADAPSISAVPPLR
IKKTPQKRHLKIENVDDRPPKKKAKLNDEKMKHEPLHCTSNRNPTSFTKQEEEEFRQMRG
SLFLKCKQHLHPIKKLFKQLEHLENHGITEGEKFNMVILGIGEHIRSLVGDIDDREERHT
WRHLYWEFVQNFSEKDALQLEQAYSVARKSEWLKQEASSSRSYERNRDEQDRKAHDHRHH
RHRQRTQEGQHSQHRDDPIGGRDGSKSTDRHRSRSHHRHGGDAVRTENLNASSGVVGGSG
SGSGTVHRSSSSGTVDKRYGGDWSNRRNFNNTTERSLKHRINRNDWSGSSGNLKTDRYNN
AFNRPSPGFSDAFNNPSMHNLHGSREHNLNSTSSSIPPPYSFQPPSSQFSWQEQKSAPLL
SSPPSMSGSSIIPPPIVSPPSSSSSRDPRSCEFDCLREPTDISSLGNQLQIIANAFTPQR
VINNIDLSTSPALDQLTSEINLLQQGHKVDTTLENGVIPLHSNLHFHTG
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggtgtccgcaggttccatcgctggcgatgatcttggagacgagagagttctc
aaaaaaagtagtcgaggggcccgtttggaggtgatgccaataggatttatcgtttccgtg
gccatattggatacgttgcctttccgtttcctcattcaggtcagtttaaatctgtcggtg
gtgtgcgcgtgtttgatggtggatgagtcccggcatcaacagcgtcgctacggcagattg
agcgaatcatcgaggagtgatgacgctgatgacatcccaaatcaggtggaaagctttggg
cagaattcctacggctgcaagccggagaagtcccgcaaacagaacatacgggagctgcga
gacgactttgattatgatcctgaactttacggaataaggcgttctgagaggggtcgcaag
gcgacacgccttgaggtcgatcacgatgattcttcaggctcacaatcccccgtggggcgg
ggttccgatccctcggaatcggagtcggaggaggatgagagttcgtccgaaagcagttct
gatcgaaggccctatcgtgttaacactagtcggttttcgggtcggacgcgtggttgcaga
gtcaactatactagcgctttcaaagacgcgagcgagtctgaagatgaagcgtcatatcgg
ccccagaatggaagttcgacagacaatcgcactcatcgcggtccggcggcagcgagcctt
aatagaaaccagcacgcgctgcctcagaaaccgcgaggtcctctgataaggatgtctgga
aaggcgcccgaaagatatttcaacccagaagtggcgaagcaagcggacacatcagacgca
gagtcctacgcaccccaccacgggcaatcgtcaaatgaatcgtcggttgaggatccacgg
ccagttcaggtcgcctatacggctgatgaggcggtgcagcaggaggttgatgtgatcgag
gaggttcttagtcaggccgtacgtcgtattggcgctacggggaactccacaacgttgtac
aactctcgtcttgagaaggatccgaatgagggctttgatccagcgaaggagaaaggtgaa
attcagtacctcatcaagtggcggtcctggagtcatatccactccacatgggagacggag
gcatcactaactagccccgatcggggttttcctgttgatggtatgaagcgcctctatgcc
tatcagtcgatgattgaagaaagaaaggctcatgaggaggtggctagtcgagacgaactg
gaggccatgctttatgaagatgagcggaacgagcttatactgtcggagaagatggaggtg
gaccgaatcgttgctcacagtcgggacaagaagaagggtaccgtggactacttgtgcaag
tggcgtcgacttgactatcgtttctgcacatgggagtgtggtcaagtgattgattacctc
ttcccagaagcgattgaagcctatcatagaagatgtagctccaccacgctgccaaattca
cgcaatgtagctcttacggaccggcctcggtttgctcgtattctggaacagcccagctat
atcggcggtggaagtccagacctgcagttgcgtgattatcagttaaagggtctcaattgg
atcgcgcacgcctggactcgtggtaacagcgtcattcttgctgacgaaatgggtctaggg
aagacagttcaagcagtcagttttctatcctatctgttccatgagtatggcatctacgga
ccttttctcatcgtcgtccctttgagcactatcagtagttggcaaaaggagatcgagttg
tggtcgccgggtctcaacttggttgtgtacgtgggtgatcatatttcccgccagttcatc
cgggagcatgagtggtcgcgcgctgctggggtcggcgggcgacggcagcagatgcttaag
ttcaacatctgcatgaccacttatgaaatactactgaaggacagatcatggcttggacag
gtttcatgggctgcgttggtggttgatgaagctcatcgcttgaaaaatgatgctagccag
ttgtacaaagccctgttcgccttcgacaccaacaccagactgctgattactggtacgcct
cttcaaaattctctcaaggaactatggtccctgctccacttcttgatgccgaggcatttt
gacgattgggaagaatttgaggacaactacagcctccaaggccaggcctcttcgtctgct
gggtacgaggccatcacccgtctgcatcgcaccatcgagccatttctattgcggcgagtg
aaaaaagatgttgagcagtccttacctgccaaaacggagcgaattcttcgggtggagatg
tcgaagaagcaagcaacactctaccgtctcatacttacacgcaactacgatggtctcatg
aaggtcacccatggccataaaacgtcttttatcaacattatgatggagctgaaaaagtgc
tgcaatcacgcaaaccttatagcccctctcgccggggaagaccagtttcagtcgaatggg
gaagctcttcgggacctcatcagagggagtgggaaactgatgcttcttgataagttgcta
caaaggctcagacctcagggtcatcgtgttctcatattcagccaaatggtgcgcatgcta
gacatcatcgctgagtatctccagtttcgtggatggggctttcagcgtctggacggctcg
attcgcggtgagctgcgaaaacaagcgcttgatcacttcaacgctgatggttccactgat
ttttgttttctcttgtcaacacgagctggtggtctcggcataaacctagcaacagctgat
acggttgtcatctttgactccgattggaacccccagaacgatattcaggcacaggcgcgc
gcacatcgtatcgggcagacaaaacaagtctctgtctatcgattggttgtgaaagactcg
gttgaagaaaaaattattgaaagtgccacccgaaaaatgttgcttgatcacttggttatc
caacgtatggattccgcaggcaatcgtggtggtgggagtgctcgaaagtctgatgcaaag
ggccaaattcttactgaaatcctacgccatggtgctgagagcatcttcaagcaaaatgac
gaggaaactgctgaggtagaggtcgatatcgatgacattctgaatcgtgctgaaacgaga
gatgccgatgtggaggaggatccctacaacccagccaatgttcttctctccacgttcaat
gtcgtaacctttgatcagtcggagcaagaggacgcaaagccagttcatattgattcctca
ggcaagtcggccaaatcctggtcggaaataattcctgaggagatgcgggagaacttgaag
caggcggagagtcaggaagcgctcctcgaccttgaattggggcctcgacggcggaaacag
gtgaggaccttccaggccggcttggataacgacaattactcgagcagtagtccttctggt
agcgatcgtaatggcaagaggctcattcgattgtcagataaggaggtgcgtgcgcttgtt
cgggcgatgaagcggtttgctcgtccacttgagcgcatagaggcaattgccgcagaagct
gaactgccttctcgaacgaatgatgaggtgcgcgaagtagtggagacaataataaatggc
tgcaaggctgcaatcgagtcagctccagaggaagaggacaatttgaaacagaagggcccg
atgtactactatggaaaggttgcaattgcttcaaagactctgcttcttagcctaagtcac
ctggagattttacataaagtgctcccaaagacctcgaaggaggatcggttgaactacgat
cttccatttcctactagagacgttaattggtctaccccatggagttctacggatgacgct
catcttctcgttggtgtgtacgagcacggctatgataattgggaggctataaagctggac
tctgaccttggtcttggttcaaagttgcttccattagctgcaaatgaacgacctcaggca
agccatgtccgcgcgcgagtcgagtatctgctcaaggcgctgaagaagcactgcgccaaa
gacagctgtgaggactcccagaaaggtgctcttcgtcgtcgtcacaacaagtcctctaaa
gaacataaaaagaaacactctaaacgtctttcaggttacgctcattccaaagagtcttcc
agatcaagcgtgaaacccaaatcagcagagtttgttgagtctgacgatagttcctccggt
tctgatgggggtgctggtgatgcggatgcgccttcgatttcagctgtaccacctttgcgc
ataaaaaagacaccccagaaacggcatttaaaaattgagaatgtcgatgatcgaccacca
aagaagaaggctaaattgaatgatgagaagatgaagcatgaaccccttcactgcacatca
aatcggaatccaacttcctttacaaagcaagaggaggaggagttccgccaaatgcgtggt
tcactttttctcaaatgtaagcaacaccttcatcccatcaagaaactgtttaagcaattg
gagcacctggagaatcatggtattaccgaaggtgaaaaatttaatatggtgatacttggc
atcggcgagcatatccgctctttggttggagatatcgacgacagagaagagcgtcatacc
tggaggcatctttactgggagtttgtgcagaatttctctgaaaaagatgcattgcagttg
gaacaggcctatagtgtggcgcgaaagagcgagtggttaaaacaggaggcatcctccagt
aggtcctacgaaagaaatcgggatgagcaagatcgtaaggctcacgatcatcggcaccat
cgccatcggcagcgaacacaggagggtcaacactcgcaacaccgcgacgatcccatcggt
ggcagagatggcagtaagtcaaccgaccgccatcgtagtcgctctcaccatcgtcatggc
ggcgatgcagtgagaacggaaaatctgaacgctagtagtggtgttgtagggggcagtggc
agtggtagtggtactgtccatcgtagttcctcatctggtactgttgataaacgatacggt
ggagactggtccaaccgtagaaacttcaacaacacaactgaaaggtcgttgaagcaccgc
attaatcggaatgattggtctgggagctcagggaatctcaaaactgatcggtacaacaat
gcgttcaatcgacccagtcctggtttctctgatgctttcaacaaccccagcatgcataat
ctccatggctcccgcgaacataacctgaattctacctccagtagcattcccccaccctat
tccttccagcctccatcctcgcagttttcttggcaggaacaaaagtcggccccgttgctc
tcctctccgccttctatgagtggcagcagcatcattcctccaccaattgtgtcaccacct
tcctcctcgtcatctcgcgatccccgctcgtgcgagtttgactgcctccgagagcctact
gatatttccagccttggcaatcaacttcaaatcattgcaaatgcatttacaccacagcga
gtaatcaataacatcgatttatcgacatcaccagccctagatcaactcacgtctgaaatc
aatttactgcaacagggtcacaaagtcgacacgacattggagaatggagtcattccacta
cactcgaatctacactttcacacgggataa
DBGET
integrated database retrieval system
