Echinococcus granulosus (hydatid tapeworm): EGR_05568
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Entry
EGR_05568 CDS
T05553
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EGR_05568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_05568
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_05568
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EGR_05568
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EGR_05568
PBAF complex
EGR_05568
GBAF(ncBAF) complex
EGR_05568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
36341283
NCBI-ProteinID:
XP_024350737
UniProt:
W6UF82
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MGLPRPNDCGIASRFYENPEIIANFDPVRTWLTRNHKKYTQAEPPTNKSLAGLCYNLLMF
QEQHFGRNVGCSIFFLFLSKASSPKLPSRLFVDFKPGGSLCYIFLICLRYRHDQGWRKLD
FSSPRLDKFMEMFDNIKRELAHQHLWSNPCVYFANINEPLLGRLREGAMFLGATIAKSPE
ESTHCIHPPPDNWPGDSRDDSVCQRFRPIFKEGRGLLLHWLFSPGSFDSWHTNLPVEWPL
NIEPEPRVPGGTPWNVDARWLLYSADHREWMLEEDFLHPDEEFLEAANAQQAQTPASTWT
SSFSASSLSASPHIVAAPSVAPPTPSESSYKKKRKRSPSPSSESYGGSGGGVGSKKRRHG
SIVPSGSSSKLVSSARKMKKEDYMELTPEDQKDENTNDTGDLTRSLDDPEPPNKVTQVAP
GTPVSMTSRNSRTSLATADLSAGDHHINSDHTSEATGATDVVGGGAGDQAGAGDLSVIEQ
AHCIVVPSYSAWFDYNAIHAIERRSLPEFFNGKNKSKTPETYLAYRNFMIDTYRLNPQEY
LTFTACRRNLTGDVCSVLRVHAFLEQWGLINYQVAAPLLPSGGASQMPSEAARLAVAASL
GPPSTAHFNVLTDSASGLQPLGSQNQAAMATLAEEAAKQSKEQVGELGKTEGTDSETKIG
VKPELDLEGRPSTVQPGQALPVGSVVGGGPPPSTGDPLLRSDQYLSGNSEAGGVAATIVT
NQILTKGATKDGWTDQETLLLLEALEMYRDDWNKVAEHVGSRTQDECILHFLRLPIEDAY
LEGDFGSICCSALADAAHPQPPFSKAGNPILSTVAFLAAVVDPRVAASAASAALKEYAQM
REEVPAGLLHEHKARVQAAVRMGREVDPNKFGLDELGIVKSEDSKRRATGEGEEEQQQPK
EETSESAEKPLEEMNESTIIQKGSSRSEGEAGQEVKEAETEEGGKSEQTTMEADEVAPVK
GAAEDGGGSEVGAKKKSGTASTNSLPPNLDSLGTAAACALAAAATKARHLASVEEKRIKG
LVAQLVETQLKKLDIKLKQFQELEAILEREHEMLEQARQQLMHDRQAFHMEVIKTMESQA
RAIVQQQQQQQVVVQQTAPIPSQVAAQPPPPNISLQQIRPQQVQLPPQQQQFPAPPQLRP
APMAQTRQPEMTPGMVVVGPLKLEPSVVPPMSMEQQPQLQQQQSSLMAAPPVPQPGMPDI
TMKTGIKASIEDEMPSDALPPPSMLTEEVEGNKKEEMSIPVDSQQHLSRPMERDEDGGHS
VDETAGEGESEIGGEVEGEDDEVMEDEEEDEA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcctcgtccgaatgattgtgggatagcttcaaggttttatgaaaaccccgaa
attatagcaaattttgatccagtgaggacttggctcacaaggaatcacaaaaaatatacc
caggctgaaccaccgaccaacaaaagccttgccggtctctgttacaatctgttgatgttt
caggaacaacactttggaaggaatgtaggctgtagtatatttttcttatttctctctaag
gcctcctctccaaaacttccatcaagattatttgtcgacttcaaacctggtggttctttg
tgctacatatttcttatctgtttgagatatcgtcacgatcaaggctggagaaagttggat
tttagttctccaaggcttgataagtttatggaaatgtttgacaatataaaacgagaactg
gctcatcagcacttgtggtcgaatccttgtgtctattttgctaacattaatgagccgctt
ctcggtcgattgcgagagggcgctatgtttttgggcgctactatcgccaaatcccctgag
gaatcaacccattgcattcatccccctcccgacaattggcccggcgatagtcgtgatgat
tccgtttgtcaacggtttcgtcccatctttaaggagggtcgtggtctcctcttacattgg
cttttctctccgggttcttttgatagctggcacacaaatcttcctgttgagtggccacta
aacatcgaacctgaacccagagtgcccggaggtacgccttggaacgtcgatgcaaggtgg
cttctttactctgctgatcatcgtgagtggatgttggaggaggatttccttcacccagat
gaagaatttttggaagcagcaaatgctcaacaagcgcaaactcctgcttccacctggacc
agctccttctctgcctcctccctttctgcttctccacacatagttgcggctccttctgtc
gccccgccaacgccttctgaatccagctacaagaaaaagcgaaaacggtctccctcccct
tcgagtgagtcctatggtggtagtggtggcggtgttggtagcaaaaagcgccggcatggt
tccattgttccctcaggctcttcttccaagcttgtttcctccgccaggaagatgaaaaag
gaagactacatggaacttacacctgaggatcagaaagatgagaacaccaatgacacgggc
gacttgacacgctctttggacgatccggagccgccaaacaaggtgactcaagtggctcct
ggcactccagttagcatgacatcgagaaattcgcgcacctctcttgctacggctgatcta
tctgctggtgaccaccacataaattcagaccacaccagcgaggccactggagctaccgac
gtcgtcggcggtggcgccggtgatcaggcgggagctggcgacttgagcgtgatcgagcag
gcgcattgcatcgtggtgccctcctactccgcctggttcgactacaacgctattcacgcc
attgaacgtcggtctctacccgagttcttcaacggaaaaaacaagagcaagactcccgag
acctacttggcataccgcaacttcatgatcgacacataccgtctcaacccccaagagtat
ctcacctttactgcgtgtcgacgtaacctcacaggcgatgtgtgcagcgtgctgcgcgtg
cacgctttcctcgaacaatggggtttgatcaattaccaggttgctgctccactattacca
tccggcggcgcttcgcaaatgccttctgaggccgcccgccttgccgttgctgcaagcctc
ggtccgccatctaccgcccactttaatgttctcaccgatagtgccagcggtttgcagcct
ctaggaagccagaaccaagccgctatggcaacccttgctgaagaagcggcgaaacagtcc
aaggaacaggtcggtgaattgggaaagactgaggggactgacagtgagaccaaaattggc
gttaagcctgagctcgatttggagggccggccttccacagtgcagccaggacaggcgttg
cctgtagggtcggttgtaggtggtggtcctccaccatcaaccggtgatcccctcctccgt
agcgatcaatatttgtcgggcaatagcgaggcaggtggagtcgcggctaccatagtgacc
aatcaaattctcaccaagggtgcaacgaaagacggttggacggaccaggagactctgctt
cttcttgaagctcttgaaatgtaccgcgacgattggaacaaggtggcggaacacgtaggc
agtcgcacacaagacgagtgcattctccacttccttcgcctgcccatagaagacgcctat
ctggagggtgatttcggtagtatctgctgctctgcgctggcagacgctgcccacccccaa
cccccattttccaaagcgggaaatcccattctctccacagtagcattcctcgctgccgtg
gttgatccacgcgtcgctgccagcgcagcttcagcggcgttgaaggagtacgctcagatg
cgggaagaggttcctgcgggtctgctgcacgagcacaaagctcgcgttcaggccgccgtg
cgcatgggccgtgaggtggatcccaacaagtttggtctcgatgagcttggcatcgtcaag
tcggaggatagcaaaaggagggctactggagaaggagaggaagaacagcaacagccgaaa
gaagaaacctcagagtcggcagaaaaaccgctggaggagatgaatgaaagcacaattatt
cagaagggaagcagcaggagtgagggagaggcgggacaggaggtaaaggaggcagaaacg
gaggaaggggggaaatctgagcagacaacgatggaggcagatgaagtggcaccagtgaag
ggcgcagcagaggatggtggtggaagtgaggtcggagccaaaaagaagtcgggtacggca
tcgacaaacagccttccaccgaatcttgatagcctggggactgcggcagcatgtgcgcta
gctgcagccgcaacgaaggcacgacacctagccagtgtggaggagaaacgcatcaagggc
ctagtcgcacaactcgtggaaacgcagctcaagaaattggatattaagctcaaacaattc
caagaactagaggctattcttgaacgggagcacgagatgttggagcaggctcgtcaacag
ctaatgcatgaccgacaggccttccacatggaggtgattaagaccatggagagtcaggct
cgtgcaattgttcaacagcagcaacaacaacaggttgtagttcagcagacggcaccaata
ccgtctcaagtggcagcgcagcccccaccaccgaatatctcgcttcaacagattcgacca
caacaagtacagctccctccgcaacaacaacaatttcctgctccaccacagctgcgtcca
gctccgatggcgcagacgaggcaaccagagatgactcccggcatggttgttgttggtcca
ctaaaactagagccctcagtggttccgccaatgtcgatggaacagcagccacagttacag
caacagcagtcatcacttatggctgccccaccggttccacagcccggaatgcctgatatc
acgatgaagacggggataaaggcgtcaattgaggatgagatgccttctgatgcactgcca
ccaccttctatgctgacggaagaagtggaaggaaataaaaaggaagagatgtctattcca
gttgattcacagcagcatttgtcacgacccatggaacgggacgaggatggggggcatagt
gttgatgagacagcaggagagggcgagagtgaaattggtggtgaggtggaaggtgaagat
gatgaggttatggaagatgaggaggaggatgaggcttga
DBGET
integrated database retrieval system
