Echinococcus granulosus (hydatid tapeworm): EGR_05590
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Entry
EGR_05590 CDS
T05553
Name
(RefSeq) Small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EGR_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egl03009
]
EGR_05590
Ribosome biogenesis [BR:
egl03009
]
Eukaryotic type
Pre-60S particles
RNases
EGR_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
36341305
NCBI-ProteinID:
XP_024350759
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MESFQVSVDGFQERKSKDKRPLLFLTPKFKENRPLNAIELQKLLGLCFLPQHYKQWPKWA
ILKRPLLVKSVVLIEYDGFPGSISDSCLIKYGPHNVIHFIQTVRFLSPINYESSWEYELL
TVPSSYLSVHAREMAHSRKAVTTPVGPKRPIDPSMVSLSNLIQNKPYKVARLESKQPEPE
APFPFPEPLSEDVFDRTSLLLSLEQMIEEQIPLPKEEAGSSWRSPWSKFVTLKEKFEPVT
AQSPIFALDCEMVQTTIGNELARVTLVDEIGCVLLDKLVKPHNPVEDYLTRFSGITREML
ASIDTRVEDVQKELGQLIPGDAILVGHSITNDLKALKIFHPYLIDTSVIYNMSQVRSGKP
RLRNLTRAFLGQTIQSGRKGHSSAEDAKATLDLVRLKLSQSLEFGDVTTPWRFPEDYLQP
STEKTVDTKIEQQPPSKPTIANLTTLLARGAFTVPETLRPYLAFLCRIYTDPTPPFHLTD
HLLADLKVTSCVQMEKPAVVGVDAEEKEGKKDEMCTMRPFLKRPGKKAAKWIAENAQRVK
FLMTRVGRPEKWDKTCSPRPPFVFGYDKSSYPARNGSRFRGLIGQVLL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggagtcattccaggtctcggtggatggctttcaagaacggaaaagtaaagacaagcgt
ccattactatttttgactcccaaatttaaagagaacaggcctcttaacgcgattgagctt
cagaagttgctgggcttatgttttctgccacaacactataaacagtggcctaagtgggct
atattgaaacgtcctcttctggttaagtcggtcgtcctaatcgagtatgatgggtttcct
gggagtatttctgattcatgtttaataaagtatggtcctcacaatgtaattcacttcatc
cagactgttcgtttcctttctcccataaattatgagtcctcttgggaatacgaacttcta
acggttccctcgtcttatcttagtgttcacgctcgagaaatggcccactcccgtaaagct
gtcactactcctgttggcccgaagcgcccgatagatccgtcaatggtttcgctctccaac
ctaattcaaaacaaaccttataaggtggcgaggctggagtcaaaacaaccggagcctgaa
gctccattcccatttcctgagcccctaagtgaggatgtttttgaccgaacttcattgctt
ttgagtttggaacagatgattgaagagcagataccgctacccaaggaagaagcaggttcg
agttggcgaagtccttggtcaaagttcgtcactctgaaggagaaattcgagccggtgact
gcgcagagcccgatatttgcactggattgcgaaatggttcagactactattggcaatgag
ttggctcgagtcacactagttgacgagattggttgcgtcctgctggacaaactcgtgaaa
ccacacaatccggtggaggattatttgactcggttcagcggcattactcgtgaaatgcta
gcgagcattgataccagagtggaagatgttcaaaaggaactaggtcaactcattcccggt
gatgcaattcttgtgggtcactcaatcacaaatgacctaaaggccctaaagatctttcat
ccctatctcatcgatacgagcgtgatctacaacatgtcgcaggtgcgatcgggcaaacca
cgattgaggaatctaacgcgagcctttcttgggcaaaccattcaaagcggacgcaaggga
cattcctcagcagaggacgcaaaggccaccttggatcttgttcgcctaaaactcagccaa
tctcttgaattcggtgacgttacaacgccttggcgattcccggaggattatctccaacct
tcaacggagaagaccgttgatacaaagattgaacagcagcctccatccaaacctacaatt
gctaacctgaccacacttctggctaggggcgcattcacagtgccggagacactgcgtccc
tacctcgcgtttctctgtcgtatctacaccgatcctacgccaccctttcacctgactgat
catctattagctgacctaaaggtcaccagttgtgtgcaaatggagaaaccggcggtagtg
ggagtagatgcggaagagaaggaggggaagaaagatgagatgtgcacgatgcggcccttc
ctcaagcgtcccgggaagaaggcagccaagtggattgcagagaatgcgcagagggtgaaa
ttcctcatgacgcgagtcggccggccggagaaatgggacaagacatgctctccacgacca
ccattcgtcttcggctatgacaagtcttcctatcctgctaggaacggcagtagatttcga
ggattgattggacaagttctactatga
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