Echinococcus granulosus (hydatid tapeworm): EGR_05629
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Entry
EGR_05629 CDS
T05553
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl04120
Ubiquitin mediated proteolysis
egl04137
Mitophagy - animal
egl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EGR_05629
04120 Ubiquitin mediated proteolysis
EGR_05629
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
EGR_05629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egl04131
]
EGR_05629
04121 Ubiquitin system [BR:
egl04121
]
EGR_05629
03029 Mitochondrial biogenesis [BR:
egl03029
]
EGR_05629
Enzymes [BR:
egl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
EGR_05629
Membrane trafficking [BR:
egl04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
EGR_05629
Aggrephagy
Other aggrephagy associated proteins
EGR_05629
Xenophagy
Other xenophagy associated proteins
EGR_05629
Ubiquitin system [BR:
egl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
EGR_05629
Mitochondrial biogenesis [BR:
egl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
EGR_05629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
IBR_1
IBR
ubiquitin
Motif
Other DBs
NCBI-GeneID:
36341344
NCBI-ProteinID:
XP_024350675
UniProt:
W6V103
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MPVVFRFNDKSVSLHVNEGWSILFLKQLVCSKLDCDPHTHFLAHQGVQLSDWDGVSNFAF
LISDDASIDVLPHSTINNCYVLCYHCDNVTPAVFTTVCDKCASPNFEVLSDIANPEIQAV
SGTCKECNNTSAKVSINCSKDVTHSPTIFLKQVFRNFDHLLCVACCSKASDIVVKFCENR
GHILCLDCFRTYAESYLSDARYVLISDIGYTLPCPLGCPVSYISDTHLFRILGKVFYSRY
KEFAAKLFCYTEGCLSCPNCGTFWERPDDKAQNAWVTCEEPYGCGVEFCSNCRSIVSGEG
NPSRCTCRQGKATTERSLLDQITRCGIFGTWSGVQLDSSDLATSSLIAVTCKSCPRCCSQ
TNKDGGCNHMVCTVCGFEWCWICHSPWSRTCQANHWF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggtctttcgttttaatgacaagtctgtgtcactgcatgtaaacgaaggttgg
agcatactgtttctcaaacagctcgtctgctcgaagcttgattgcgatccccatacccac
tttcttgcccaccaaggcgttcaactgagtgattgggacggagtttctaattttgctttc
ttgatatctgatgatgcttccattgatgttcttccacactccactatcaacaactgctac
gttctctgctatcactgtgataatgtgactcccgctgtatttaccactgtttgtgacaaa
tgtgcttctcccaacttcgaagttttgtctgatattgccaaccctgagattcaagcagta
agtggcacctgcaaagaatgcaacaacacctccgccaaagtttcaatcaactgctcaaag
gatgtaacccacagtccaaccattttcctgaaacaagtttttagaaacttcgaccacttg
ttatgcgttgcgtgctgcagcaaagccagcgacatcgtggttaagttttgtgaaaaccgt
ggccacatcctctgccttgactgctttcgcacttatgctgaaagctacctatccgacgcc
agatacgtgctaatttctgacatcggttatactcttccttgtccgcttggatgcccggtg
tcttacatttcggatacccatctttttcgtattctaggtaaagtgttctactcccgctac
aaggagttcgccgctaaactcttctgctacacagaaggttgtttatcttgtcccaattgt
ggaactttttgggaaagaccagatgacaaagctcagaacgcctgggtcacttgtgaggag
ccatacggctgtggagtggaattttgttccaattgtcgcagtattgtctccggtgaaggt
aacccctctcgatgcacatgtagacaaggtaaagcaactacagagcgatcactgcttgac
cagattactcgttgtggaatatttggtacttggagtggtgtccagttagactcttcggat
ttggcaacttcctctctcattgcagtgacctgtaagagctgccctcggtgttgcagtcag
accaataaagatggcggttgtaatcacatggtgtgcactgtttgtggtttcgaatggtgc
tggatatgtcactccccttggtccagaacttgtcaagcgaatcattggttctag
DBGET
integrated database retrieval system
