Echinococcus granulosus (hydatid tapeworm): EGR_05857
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Entry
EGR_05857 CDS
T05553
Name
(RefSeq) Replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03030
DNA replication
egl03410
Base excision repair
egl03420
Nucleotide excision repair
egl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGR_05857
03410 Base excision repair
EGR_05857
03420 Nucleotide excision repair
EGR_05857
03430 Mismatch repair
EGR_05857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egl03032
]
EGR_05857
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_05857
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_05857
DNA replication proteins [BR:
egl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EGR_05857
DNA Replication Termination Factors
ELG1-RFC complex
EGR_05857
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EGR_05857
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EGR_05857
Check point factors
HRAD17(Rad24)-RFC complex
EGR_05857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_24
AAA_22
AAA_16
AAA_11
AAA_14
Rad17
AAA_5
ResIII
RuvB_N
DEAD
nSTAND3
AAA_assoc_2
AAA_19
AAA_7
AAA_30
DUF815
AAA_18
bpMoxR
NPHP3_N
ATPase_2
Mg_chelatase
Viral_helicase1
Sigma54_activ_2
AAA_25
AAA_28
AAA_3
Cdc6_lid
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
36341572
NCBI-ProteinID:
XP_024350452
UniProt:
W6UED0
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MASDLPWIEKYRPESLNDLMGHELIINTSNVYIFGYFGKVRRFLNQGKLPHLLLYGPPGT
GKTSTILSVAKHLFGPKEFSSMVLELNASDDRGIGVVREQVLTFASTKTLFSGKFKLIIL
DEADAMTKDAQNALRRIIEKFSENARFCLICNYLSKITQAIQSRCTRFRFPPVQESHMMA
CLGEIAKKEGVQLTDDGKVAIHRFSSGDMRVAINLLQSASMSSQVVDEASVYACTGYPTP
REMRTLLEWCLNEPLPMAFKKIIELKVEKGIALQDIVSELHPLIMQVKMPDSVKVELTTM
LSDVEYRMSYGASEKLQLGAVCAAFANARDSLEALEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgacttgccttggattgagaaatacaggccagaatcattgaatgacttaatg
ggccatgaattaataataaacacaagtaatgtttatattttcggttattttggtaaagtt
cgtagatttctcaatcagggtaaattgccccatcttttgctttacgggccccctggaacg
ggcaaaacgagtaccatactctccgttgcgaagcatcttttcggacctaaggaattctcc
tctatggtacttgagttgaatgcttcagatgatcgtggtattggagtcgttcgcgagcaa
gttttgacttttgccagcacgaagacgttgttctctggaaagtttaagcttatcattctt
gatgaagctgacgcaatgaccaaggacgcacaaaatgccttacggcgaattattgagaag
ttttctgagaatgcgcggttttgtcttatttgcaattatctctcaaaaatcacccaggct
attcagtcgagatgcaccaggtttcgttttccacccgtgcaggaatcacatatgatggct
tgcctcggtgaaattgccaaaaaggaaggtgttcaacttaccgatgatggaaaggtcgcc
attcatcgtttttcttccggtgatatgcgcgtagccataaatttgttgcagagcgcttcc
atgtccagccaagtggttgacgaggccagtgtctacgcctgcactggatatcctactcca
agggaaatgcgaaccctccttgagtggtgtctcaatgaaccgcttcctatggctttcaaa
aaaataattgagctgaaagttgagaaaggcattgcgctgcaggacatcgtttcagagctg
catccattaatcatgcaagtgaaaatgccggacagcgtaaaagttgagctgacaaccatg
ctctccgacgtggaatatcgtatgtcttatggtgcttcggagaaactgcaactcggcgcc
gtctgtgcggccttcgcaaacgcaagagactcccttgaggcacttgaggcctaa
DBGET
integrated database retrieval system
