Echinococcus granulosus (hydatid tapeworm): EGR_06277
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Entry
EGR_06277 CDS
T05553
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013
Nucleocytoplasmic transport
egl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EGR_06277
03015 mRNA surveillance pathway
EGR_06277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_06277
03041 Spliceosome [BR:
egl03041
]
EGR_06277
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EGR_06277
Spliceosome [BR:
egl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
EGR_06277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
NYD-SP28
NYD-SP28_assoc
Rop-like
TreT_GT1
Motif
Other DBs
NCBI-GeneID:
36341992
NCBI-ProteinID:
XP_024350049
UniProt:
W6UBT4
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MYANTVAMDMHTRKLYFGHEEDRDKGPSANSDDLEERIAARRLRISERVASLRPDYFDEK
ASIDEEAAVTATSNPLANAQVALSAQRIVNLCRNGNAFITNLKVACDARENLRRVEEEEL
DNVRQAKFDAEQKATTKLFEEVEEKWEEAKTTKGAHELHDIFEELKTNCAKIIDEKNKLI
YDIHLELKAKDDHFVKELRKRTEDVDIMVERMESQMKSMQRAYDFELKEIEKAFLQDRED
LLREQTTDWEDFMRELRKKQEDYLEERKNRITELEELIQKLRINHTEEFNALKLRLTTEV
QNMETDLQQMKAMYQLNLEKLEYNFQVLKRRDEENTFTRSQQKRKITQLQDQLNRLRVFS
KKQEESLRHENLVLSDDYKKMMEAFRDLQKKSKSLIKFEEQNFRDVWNMNEDELRKDAEK
LMAADKVIMEQQLGLTWTPPEVPFMNNSGPISLAEKERRTTSIAARALQLPTYKSRSVNI
RKLPKCRLPQTLKEAPKEIVGQFLTMLAFEPEFLIEVKVKKLLKDLPFDDQKLIRLDAVL
NVLKVNSEELLDKLFTYFILPCDSRRPQPLTMSPPVSAAFGQDMQPDGEKSEPQECESQS
TTPPESLAQTEAPTFNEEVEFSAIRLIDPIDVPQVLHRFAVENCVHATVAAFERAMENTA
PVTTSSPEDVVNEAEEKDGATKATHRISARQQDLLDMEMDREHWYKYLNTFAPDEKRRMW
AGLKQTLQRYLTILQARSRLIVENEALRSQNIELRHLLQLYSQSQWSPWMQQKDLELYKG
RKVLYSSNERKEELSQYIKSPIVKGINPLIHFVVYESNLEIKILIGCKVGGIAWLTSDSK
MTDAGFFKGTNTDQDSRFADKKKKLLKSMKFGDNLNEKVDTQRVNVDSIKPWIVKRITEL
LSYEDDIVCDFVVNMLSEQFPDPKDIQINLTAFLGSKSARIFVTELWDLLLSAMNTTGGV
PAILLEARKAEILGSKAQEERFRAEQASRQSEGGSAGSGGGMVNRPRERGDGPSPNHPTS
PIAANQRHRSPPSPPRGERKEVDSRGRNRHRYSSSPDSERERSRSRRRRREEEEAEAEAA
EQSDWDRRRRRHRRSYSRSPSSHRRDYHRHHHRRGHRSPRDRRYEEMEVEADIRSFHERR
RPRLSSREGRRPREEERERVVHNADGPICVPRAGTPSPPPPPSQRQQSSPLTDAKVNGGK
TDAEESVERSHRGGKSPRRGVTRSPPREDRSRRTDEVYREERRPRDLDTDKRAYKERSSW
RRDDSYERRRSGRLTMENETYVEEHRRHDNHEELEDRTKLRQRRDKKPVEEREELEQHQQ
RLMPSTSSSSRRSPEGPTLPPGERGGRKDRREREDAPQASPEGPELPKGLAKQRKEKEEE
KVEKVQKKTKKRRDSSSSSSSSSSSTSSSSSSSESSSDEEESSDSSSSDSDSSSNESDSS
SSSSSSSDDSDVRRKGKKGKNSKAHGKKGKSTKRRKMRKLKAKEKSMKKKKREMQMLKES
TKKNKREPQQLLSPEGPKLPPPAGELESPGVEWKEKRREGDVNEAPSSTSSSSSEESYSD
SSSSSSSSSTSSSSEEKREKWRKGLSKHAPRDDDAVEGDKERGRKRHNDVNVTESRGDGG
KRRRRTGDADVTEGRDKEEEEDEDGLSRRRGSSSRSEEDRLRRRALESLKRKNAAAEASR
LMDSA
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgaacactgtagctatggacatgcacacgcgtaaactctactttggtcacgag
gaggatcgcgacaagggtcctagtgccaactccgatgaccttgaggagcgaatcgcagcc
cgtcgattacgaatctcagagagagtggcctctttacgtcctgactacttcgacgaaaag
gcgtcaatcgatgaggaagcggctgtgacagctacctcaaatccattagctaatgcgcag
gtggcactaagcgcacagcgaatcgtcaacctctgtcgcaatggcaatgcctttatcacc
aatctcaaggtggcctgtgacgcacgtgaaaatctacgtcgggtggaagaagaggagctt
gacaatgttaggcaggctaagtttgatgcagaacaaaaagcaacgacaaagttgtttgag
gaagttgaagagaaatgggaggaggcaaaaacaacaaaaggcgcccacgagttgcacgac
atttttgaggagttaaagaccaactgcgccaaaattattgacgagaaaaacaaactgatc
tatgacatccatttggagttaaaagccaaggacgatcattttgtgaaggagctcagaaaa
cgaacggaagatgtggatatcatggtggagcgaatggaatcgcaaatgaagtcaatgcaa
cgcgcctatgacttcgagttgaaggaaattgagaaagcatttctgcaagatcgcgaggat
ctactgagagagcagacaaccgattgggaggattttatgagagaattgaggaagaagcag
gaggattacctggaggaacgaaaaaatcggattactgaactagaggagttgattcaaaag
ttgcgaatcaatcacaccgaggagttcaatgctctcaagctgcgtttaacaacggaagtt
cagaacatggaaacagaccttcagcagatgaaagcgatgtatcagttaaatttggagaag
ctggaatacaactttcaagttctgaagagacgagatgaggagaatacgtttacacgatct
cagcagaagcgaaaaattacgcagttgcaagatcaactaaaccgcctccgtgttttttcc
aagaaacaggaagaatctctccgacacgagaatctggttctctcggatgattacaaaaaa
atgatggaggctttcagagacctccaaaagaagtcgaagtcactgataaaattcgaggaa
cagaattttcgcgatgtttggaatatgaatgaggatgagttgaggaaagacgccgaaaag
ttaatggctgccgacaaagttatcatggagcagcaattgggactcacatggactccaccc
gaagtcccctttatgaacaacagtgggccaatttcactggcggaaaaggaaaggcgtacc
acctctatcgcggcacgagctctacaacttcccacttacaagagtcgatcagtcaatatc
agaaagttaccaaaatgtcgtttgccacagactctcaaagaagcaccaaaggaaattgtc
ggccaatttttgacaatgcttgcttttgaacccgaatttctgatagaagtaaaggtgaaa
aagttgctcaaagatctgccatttgatgaccagaaactcattcggctggatgcggtcctc
aacgtgttgaaggtgaatagcgaagaactgttagacaaacttttcacctacttcattctg
ccttgtgatagccgcaggccacaacctttaaccatgtcgccgcctgtgtcagctgctttt
gggcaagatatgcagccagacggtgagaaaagtgagccacaggagtgtgagtcgcagagt
acaacaccgccggagagtctcgcgcaaaccgaggcacccaccttcaacgaggaagtggaa
tttagtgctatccgcctcatagacccaatcgatgtgccgcaggtattgcatcgctttgct
gtggagaactgcgtacacgccaccgtggccgcttttgaacgcgcgatggaaaacaccgcc
cctgtcactaccagctcacctgaagacgttgttaacgaggctgaggaaaaggatggtgct
actaaggccacacatcgaattagtgcacgtcagcaggatctcctagacatggaaatggat
cgggagcattggtacaaatatttaaatacctttgcaccggatgaaaagagacgaatgtgg
gcaggactgaaacagacgctacagcgctacctcaccatcttacaagcgcgatcaaggctc
attgttgaaaatgaagcgcttcgaagtcaaaatattgagctgcgtcatttattgcaactg
tattcgcagtcgcagtggagcccatggatgcaacaaaaagacttagaactctataaaggt
agaaaagtactctattcttctaatgaacgaaaagaggagttgtctcaatatatcaaatcg
cctatcgttaaaggaataaacccactcatccattttgttgtatacgagtcaaatcttgag
atcaaaattttgattggctgcaaagttggtggaatagcctggctgacttcggattccaag
atgacggatgcaggctttttcaagggcacgaataccgatcaggattctagatttgccgac
aaaaagaaaaaacttttaaaaagcatgaaatttggtgacaacttaaatgaaaaagtcgat
acacaaagagttaacgtcgactcaattaaaccctggatcgttaagcgcattacagagctt
ctctcctacgaggacgatattgtctgcgatttcgtcgtaaatatgctctcagagcagttt
cctgaccccaaggacattcaaattaatctcacagcttttctgggcagcaagagtgcacgg
atcttcgtcacagagctctgggatctgcttctttccgccatgaacacgactggcggcgtc
cctgccatcctcttagaagccaggaaggccgaaattctcggtagtaaggcccaagaagag
agattccgagcggagcaggcctcgagacaatcagaaggaggaagtgcaggtagcggaggc
ggaatggttaatcgaccgagagaacgtggcgacggaccttctcccaaccatcccacctca
cccatcgctgctaatcaacgtcatcggtctccaccgtccccgccacgcggtgagagaaag
gaggtcgactcccgtggcaggaaccgtcaccgctactcatcttcgcccgattccgaacgc
gagcgaagtcgcagcagacgtcgacgcagggaggaagaagaggcagaggccgaagccgcg
gaacagagtgattgggatcggaggagacgacgtcaccgtcgcagttactctagatcgccc
tctagtcatcgacgtgactaccatcgccaccaccatcgtcgtggacatcgaagtccaagg
gatcgtcgctatgaggagatggaagtggaggcggacatccgctccttccacgagcgccgt
cgacctcgcttaagttcaagggaagggagaaggccaagggaagaggagagggagagggtc
gttcacaacgctgacggtccaatctgcgtgccccgtgcaggcacaccttctccaccgcct
ccgccatcccagcgtcaacagtcttcgcctttgaccgacgctaaagtcaacggtgggaag
accgacgctgaggaaagtgtagaaaggtcccatcgcggtggaaagtcacctcgtcgaggt
gtcacgaggtcacctcctcgtgaagacaggtctcgacgcacggatgaagtctatcgtgaa
gagagaaggcctcgcgatttggacacggataaacgagcttataaggagaggtcctcttgg
cggcgagacgattcctacgagagacgtcggagcggtcgtctgaccatggaaaatgagaca
tacgtagaggagcaccgtcgacacgataatcacgaggaactggaagatcgtaccaaatta
cgacaacgtcgagataaaaagccggtagaggagagagaggaattggagcaacaccaacaa
aggctaatgccctctacttcctcgtccagccgtcgcagtcccgagggacccacccttcca
ccaggtgaaaggggtgggagaaaggacaggagggaacgagaagatgctcctcaagcttct
ccagagggtccggagcttccaaaaggcctagcaaagcagcgaaaggaaaaagaggaagaa
aaagtggagaaggtgcaaaagaagaccaagaagcgacgagactcttcgtcgtcgtcatca
tcatcatcgtcgtcaacatcctcctcgtcgtcttcctcagagtctagctcagatgaagag
gagtcatcagattcaagttcttctgactcggacagtagcagcaacgaaagtgacagtagc
agcagctcctcttcgtcatctgacgattcggacgttcgcaggaaagggaagaaagggaag
aattcaaaagctcacggaaaaaagggcaagtccacgaagaggcggaagatgcgtaagctc
aaagcgaaggagaagtcgatgaagaaaaagaagcgagagatgcaaatgctgaaggagagt
acgaagaagaacaagagggagcctcaacagctactgtctcctgaaggtccaaaacttcca
ccacccgctggcgaacttgaaagtcctggtgtggaatggaaagaaaagcgaagggaaggt
gacgtcaatgaagccccatcttctacttcctcatcatctagtgaggagtcctacagcgat
tcatcctcaagctcgtcttcgtcgtcaacgagttccagttctgaggagaagcgtgagaag
tggaggaaaggactttcgaaacacgctccccgtgacgatgatgctgttgaaggagataaa
gaacgcggacgcaaacgacataacgacgtgaatgttactgaaagtcgtggcgacggtggc
aaacgtcgaagacgtaccggagatgccgatgtcaccgaaggaagggacaaggaagaggag
gaggatgaggacgggttgagcaggcgtcgtggaagcagtagtcgaagcgaagaggatcgt
ctgcgacgcagagcgttggagtcgttgaagcggaagaacgccgctgctgaggcctcgcgt
ctaatggattcagcttaa
DBGET
integrated database retrieval system
