KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_06440
Entry
EGR_06440         CDS       T05553                                 
Name
(RefSeq) Pentatricopeptide repeat-containing protein
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Brite
KEGG Orthology (KO) [BR:egl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:egl03016]
    EGR_06440
   03029 Mitochondrial biogenesis [BR:egl03029]
    EGR_06440
Transfer RNA biogenesis [BR:egl03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EGR_06440
Mitochondrial biogenesis [BR:egl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    EGR_06440
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long
Other DBs
NCBI-GeneID: 36342155
NCBI-ProteinID: XP_024349850
UniProt: W6UYK3
LinkDB
Position
Unknown
AA seq 703 aa
MWNFARQLGLVTAPQLMRLVNDLDKRVYRAQFPANPTYVADRSVDSSSNSVARGVISLNA
EPVVFGALADRAGLLDPDDFDEFDVAGEQPVKDNHLRLSKTGRNHEPTWYLWRINKLCKD
GDTRSAVELFFHKMLTVDRVMPDRNIIHLLLSGLAEVGDSESAFKVYRKMTELGIPATNS
TYSRLFSSQSDLDLLAGPALGRAKGLWVRLHERGFRMNRITYNTLLQTLAKAGDLHACFQ
ALDAMLLGQGGLPPSILHSSMTPPSPTCSAEPLPPFRPDEYTLTAVLTAVLQSFKSGFLV
SSLDALRLALHAWHLILPRLPRRQPSLHHFTLLAGIAALTEPKNGRFSLPTSLGSGIGRR
KADTSAKNYLEVIPESLPKLREPQPSLSPRILASEKAAKNLLRRVALLASGGDIPSQLST
NSTPSDTTPLVPVSSNSCFLLPNTFSPDWTNPDIVMRSQVNLLLPLPQEGIRLSQSPTSP
LITKVAALLPPPSENAGAELDRWESALLNAMDSNKVILDLPVLNVLLQRRTTHGLPVDEL
MSIANRQGLSPDEFTWSCLARGCRTTKQVRDFLTSYSKAAKLTWDSGLPAHVGTVRPSLH
VYATLLASTKFYWDSKIIIIRSMMGSSQLTTKSKQRKKEKESPDSQPYDSPILPNRRLIA
NLELEIAHFRDLVARGIVPKGSGFSRIFDFMGQVCELAIELEV
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgtggaactttgctcggcagttaggtttggtcacagctccccagttaatgcgtttggtt
aatgacctggataaacgagtgtatcgtgcgcagttccctgcaaatcctacttacgtcgct
gatagatcagtagactcttcaagcaattcagtggcaaggggagtgattagtttgaatgct
gaaccggtggtatttggagctcttgctgatcgggctggtctattggatcctgacgacttt
gatgagtttgatgtcgcgggggagcagcccgttaaagataaccatcttcgcttatcaaaa
accggaagaaatcacgaacctacttggtatctttggagaataaacaagctctgtaaagat
ggagatacgcgctcggcagttgagctttttttccacaaaatgttaactgttgatcgagtc
atgccggaccgtaatatcattcaccttcttttgagtggactggccgaggtgggtgacagc
gagtctgccttcaaggtttatcgtaagatgaccgaattgggcatccctgcaaccaattct
acatattcacgcctttttagttcgcaatctgacctcgatttgcttgctggacccgctctt
ggacgtgcaaagggtctttgggttcggttgcacgaacgtggctttcgaatgaatcgaatc
acctacaacacgcttctgcagactctggctaaagctggtgacctccatgcctgcttccag
gcgctggatgcgatgttgctaggtcagggtggactgccaccatcgattctgcactcttcg
atgactcctccttcgcccacttgctcagctgagccccttccgcccttccgaccagatgag
tacactctgactgcggttctcacagcggtgctacagtctttcaagtctggcttccttgtc
tcgtcccttgacgccctccgcttggcactgcacgcgtggcacctcatcctccctcgtctg
ccacgtaggcagcccagtttgcatcactttactctccttgctggcattgctgctctcacc
gagcccaagaatggtcgattttccctccccacatcccttgggagtggtatcggacggcga
aaagccgacacctcagcgaagaactatcttgaggtgatccccgagagcttgccgaaactg
cgagaaccgcagccttccctatctccgcgcattttggcctctgagaaagcggcaaagaac
cttttgagacgggtggcgcttctggcatcgggtggtgacataccgtcacaactctcaact
aactcaaccccctccgacaccactcctctagtacctgtttcttcaaattcctgttttttg
ctgccgaatacgttttctcctgattggactaatcctgacatagttatgcggagccaagta
aatctcttactaccgcttccgcaggagggtatcagactctctcaatcaccgacgtcacca
ctgattacaaaggttgccgcccttttgccacctccctcggagaacgcgggcgccgagttg
gatcggtgggaaagcgcactacttaacgctatggatagtaacaaagtcattttggactta
cccgtactcaacgtcctccttcagcggagaacaacacatggactgcctgtggacgaattg
atgtctatcgcgaatcgtcaaggcctttcgccagatgaattcacttggagttgtttggcg
cgcgggtgccgcaccacaaagcaggttcgagatttcctcaccagctactcaaaggctgct
aaactgacgtgggactcagggctaccagcccacgttggcacagtgcgccccagcctccat
gtttacgccaccctccttgcctccaccaagttctactgggactctaagataatcattatc
cggtctatgatgggctccagtcagttgactacaaagtcgaaacagcgaaaaaaggaaaag
gaatcaccagactcacagccttacgactctcccatcctcccaaaccgtcgtctaatcgcc
aatctcgagctggaaatcgctcacttccgtgatttagttgctcgcggcatcgtaccgaaa
ggcagtggcttttctcgcatttttgatttcatgggtcaagtgtgcgagcttgcgatcgaa
ctggaggtgtga

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