Echinococcus granulosus (hydatid tapeworm): EGR_06510
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Entry
EGR_06510 CDS
T05553
Name
(RefSeq) Spliceosome RNA helicase BAT1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013
Nucleocytoplasmic transport
egl03015
mRNA surveillance pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_06510
09122 Translation
03013 Nucleocytoplasmic transport
EGR_06510
03015 mRNA surveillance pathway
EGR_06510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_06510
03041 Spliceosome [BR:
egl03041
]
EGR_06510
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EGR_06510
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EGR_06510
Spliceosome [BR:
egl03041
]
Complex C
Other components
EJC/TREX
EGR_06510
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EGR_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF8110
Cas3-like_C_2
AAA_19
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
36342225
NCBI-ProteinID:
XP_024349823
UniProt:
W6UKL4
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MGTLLRQTFLGLLAMADENELLDYDEEDQETVQDSKSNGDIQAKRAVKGDYVTVHCSGFR
DFILKPEVLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLD
PEESGITRVIVLCHTRELAYQISKEYERFSKYMPKIKVSVVILILVIVSQVGVFFGGMPL
RKDIESLNKCAPHIVVGTPGRILDLIRNKALKLDHIRHFIIDECDKMLDTLDMRRDVQDI
FRMTPRCKQVMMFSATMSKEIRPVCRNFMQDPLEIFIDNDSKLTLHGLRQHYVKVKENEK
NRKLFELLDELQFNQVIIFVKSVQRCIALAQLLVDQNFPAIAMHRAMSQEERLERYQAFK
NFHKRLLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDE
HDANILNDVQNRFEVNISELPDVMEIASYMEDR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggcactctgctgcgtcagacttttctaggtcttttagcgatggctgatgaaaatgag
ctcttggattacgatgaggaggatcaggaaaccgtacaggattccaaatcaaatggtgat
attcaggccaaaagagctgtgaagggtgactatgtcaccgttcattgctccggcttccgt
gacttcattcttaaacccgaggtcttgagagctattgtggactgtggctttgagcatcca
tcagaggttcagcatgagtgtattcctcaggccattctttcgatggacgttctttgccag
gccaagtcgggaatgggcaagaccgctgtctttgtcattgccacgctgcagcagttagat
cctgaggagagtggtattactcgagtcatcgtcctctgtcacactcgcgaattggcctat
caaatcagcaaagagtacgagcgtttctccaagtacatgcctaaaattaaggtaagcgtg
gttattttaattctggtcatcgtgtcccaggttggggtctttttcggtggaatgccactt
agaaaggacatcgaatcgctgaataagtgcgcgccacatattgtggtgggcacccctgga
cgtattcttgaccttattcgtaacaaggcattgaagctggaccacattaggcacttcatc
atcgacgaatgcgacaagatgctcgataccctcgacatgcgtcgtgacgtccaggacatc
tttcgcatgacgccgcgttgtaaacaagttatgatgtttagcgcaaccatgagcaaagag
attcgtcccgtctgtcgcaattttatgcaagatcctctggaaatctttattgacaacgac
tccaagttgaccctgcacgggctgcgtcaacactacgtcaaggtgaaggagaacgagaag
aataggaagctctttgagctgctcgatgagctgcagttcaaccaagttataattttcgtc
aagtcggttcagcgttgcatcgccctggcgcagcttctcgtcgaccaaaacttccctgcc
atcgcaatgcaccgtgcaatgtcccaggaggagcggttggagcgttatcaggctttcaaa
aacttccacaagcgtcttctcgtggctacgaatctctttggtcgtggaatggacattgaa
cgtgtgaatattgttttcaactacgatatgcccgaggactcggatacatatctgcacaga
gttgcgcgagctggtcgctttggtaccaagggtctggcaatcacgttcatttcggacgaa
cacgacgccaatattctgaacgatgtccagaatcgattcgaggtaaacatcagtgagcta
cctgacgtcatggagattgccagctacatggaggaccgttaa
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