Echinococcus granulosus (hydatid tapeworm): EGR_06524
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Entry
EGR_06524 CDS
T05553
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egl03041
]
EGR_06524
03016 Transfer RNA biogenesis [BR:
egl03016
]
EGR_06524
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EGR_06524
Spliceosome [BR:
egl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EGR_06524
Transfer RNA biogenesis [BR:
egl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EGR_06524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
B12-binding
Motif
Other DBs
NCBI-GeneID:
36342239
NCBI-ProteinID:
XP_024349837
UniProt:
W6UCZ3
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MGVWFLTLLLLLIASVYGVYSSKGRPGTRSPSHNSKASVSGPITSSGLYRGPWVAGYIFG
ALVVVASIGLLVYFCCLHRRGKQSPSAVDEVQDVPSTPPPPPPNFANAPPPYPASPPPGI
QPPPYPAVTAPAPTAPYPAPTNVALGSSLTDFKSFYDPPETSALVYHEPPELHRQKVGPR
YYGSYALKIYPASSMRNLDLVFDKVHSGYDNFEGRLSFYPGDYASCCECGRSAQPELSDK
WLRPNTVSSLPLLRQIPSALNVKVVSTLYYTQMSDLFEGFCGHRKSFRVERRWMVKLCAD
RLSDTPDHFLSEKSLAYNYCLPLYALQLGAERFDPHSQAPISSREHYIKWEQLSKLVEMG
VLPELSKAVQEMDWILPTDIQSEAVPLILGGGDVLMAAETGSGKTGAFCLPVIQIVYETL
KDLEGGKLTKKTPEGGIKVAKNVCLNVFDRTEAFAIDPNGLLCQSRDQFGWHGARATKGV
RNHGKYYYEAKVTDDGLCRVGWSTALACHDIGTDTESFGFGGTGKKSHRRQFDDYGESFG
LNDVLGCYLDLDSRTISWSKNGRRFPKAFDVPPHHVSAGLFPSVSLKNAELLFNFGETPF
AFPPTGGFISINTAEEKNVVLSSYTGGKSQGSFKPNAKSPLALIVEPSRELAEQTYDQMI
KFKKYLKDPSPRVTLIIGGTSARELTEEINKGVDIVVATPGRLEDMISTGALFLSNCRFF
ILDECDGLLSAGYEPMIQRLHALCPKVTPDGKRLQMVVCSATLHSFDVKKIANRLMHFPV
WIDLKGQDSVPETVHHVVCPVDPHQDTSWRQLMSSSTHHIQTDGVHMKDRLNPNYETPEL
MSEAVKLLKGQYVVRAIEQQKMDRALIFCRTKLDCDNLEQYFITLGGGPSKSHGQFSCVC
LHSDRNPAERKTNLQKFKNGDVNFLICTDVAARGIDITGLPYVINVTLPDEKQNYIHRIG
RVGRAERMGLAISLVSTCKEKVWYHANCNSRGRGCFDTRLVSSGGCCIWYDEKQLLGEIE
EHLGITIDTVSKDLQVPANEFDGKVVYGQKLKNIAPSYKGHTAVLKEALKELNVMEKRAQ
ISFLNLRYGGAAKC
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgtggttcttaacgcttttgcttctacttatcgctagtgtttatggcgtttac
tcctcaaagggtcgtcctggaactcgttccccttctcataactccaaagcctcagtttcg
ggccctataacaagttccggtctctaccgtggaccatgggtagcggggtatatcttcggt
gcccttgtggtggtagcgagcattggattgttggtatacttctgctgtctccatcgtcgt
ggcaagcagtcaccatcggcagtggatgaggtacaagacgttccgtcgacaccaccgcct
ccaccgccgaattttgctaacgcgccgccgccctatcccgcttcacccccaccgggcatc
cagccaccgccgtatccagccgtgaccgcaccggccccgactgctccttatccagcacct
accaacgtcgctctgggctcgagcttgacggattttaaatcattctatgatccacccgaa
acgagtgcacttgtttaccatgaaccaccagaattacataggcagaaagttggtccacgt
tattatggatcctatgctctcaaaatttatccagcctcatcaatgagaaatcttgatcta
gtgtttgacaaggtgcactccggttatgacaattttgagggcaggcttagcttttaccct
ggtgactacgccagttgttgcgaatgcggtcggtcagctcagccagaactgtcggacaag
tggctccgcccaaatactgtttcgtctctccccctcttgaggcaaattccaagtgctttg
aatgttaaggttgtgtccactttgtactacactcaaatgtcagatctgtttgaaggcttc
tgtgggcacagaaagtcctttcgtgtggaacgtcggtggatggtgaaactttgtgctgac
aggctcagtgacaccccagaccactttttatcggagaaatctctggcttacaactactgc
cttccgttatacgctctacagcttggggctgaacgctttgacccacatagtcaggctccc
atatcctctcgcgagcattatataaaatgggaacagctttcgaaactggtggaaatgggc
gtattgccagagctgtcgaaggcagtccaggagatggactggattctgccgacggacatt
cagagcgaggctgtgcctctcatcttgggtggtggtgacgttctcatggccgcggaaact
ggcagtggaaagactggtgctttctgtcttcctgtcattcagattgtctacgagacgctc
aaggatctagagggtggaaaattgaccaaaaagactcctgaaggtggcatcaaggtggca
aaaaatgtttgcctcaacgtgtttgatagaactgaggcctttgccattgacccaaatggt
ctcctctgccaaagtcgtgatcaatttggttggcatggagcacgggccacaaagggtgtc
agaaaccatggcaagtactactatgaggccaaagtcaccgacgacgggctgtgccgtgtt
ggctggtcaactgcactggcctgtcacgatattggcacagacaccgagagtttcggtttt
ggcggtacgggaaagaagtctcatcgtcgtcagttcgacgattatggcgagtcttttggg
ctcaacgatgtcctcggctgctacctcgaccttgactcccgaacaatcagctggtccaaa
aatggcagacgtttccccaaggcttttgatgtaccacctcatcacgtctcggcggggctt
tttccctcggtgagtctaaagaacgccgagttgttgttcaacttcggggaaacaccgttc
gcctttccacccaccggcggtttcatttcgatcaacactgccgaggagaagaatgtggtt
ttatcgtcctataccggtgggaagtcacagggctctttcaaacccaatgcaaaatctcca
ctggctttgattgttgagccttcacgggaattggcagagcaaacctacgatcagatgatc
aaattcaagaaataccttaaggatccaagtccccgtgtcacattgatcattggtggaacc
agcgccagggagctaacagaggaaattaacaagggggttgacatagttgtcgccacacct
ggtcgtctggaggatatgatctcgacgggtgccttatttttatccaattgtcgctttttc
atcctcgacgaatgtgatggcctcctttccgccggctacgagccaatgatccaacgtctg
cacgccctctgtcccaaggtcacgccggatgggaagcgtcttcaaatggttgtgtgctca
gctacgctgcactcgttcgatgttaagaaaatcgccaaccggttgatgcacttccccgtt
tggatcgatttgaagggtcaagactccgttccagaaacagtccatcatgtcgtatgcccc
gtagatccgcatcaggacacctcatggaggcagttgatgagctcatccacccatcatatc
cagactgacggtgttcatatgaaggatagacttaatcccaactatgagacgcctgagctt
atgtcagaggcagtaaagctactcaagggacagtacgtggtacgagcgattgaacagcag
aaaatggaccgtgcactgatcttctgtcgcaccaagttggattgtgataatctggagcag
tatttcatcactctgggtggtggtccatcaaagtcccatggtcaattcagctgcgtttgt
cttcacagtgatcgcaatcctgcggaaagaaagacaaatttgcagaaatttaagaacggc
gatgtcaacttcctaatttgcaccgatgtcgcggcacgtggtatcgacataacaggccta
ccctatgtaatcaacgtgacactgccagacgagaaacagaactacattcatcgtattggt
cgtgttggcagagctgaacgaatgggtctcgctattagtttggtctccacgtgcaaagaa
aaggtatggtaccacgctaactgcaactcccgtggacgtggctgtttcgacacacgtcta
gtatccagcggtggctgttgcatttggtatgatgagaagcagttgttaggggagattgag
gagcacctgggcatcaccatcgacacggtatcaaaggatcttcaggttcctgccaacgag
tttgatggaaaagtggtctatggacaaaagttgaagaatatcgcaccgagttataaaggt
catacggctgttttgaaggaggcactaaaggaactcaatgtgatggaaaagagggcgcaa
ataagcttcctcaacctacgatatggcggtgcagctaagtgttga
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