Echinococcus granulosus (hydatid tapeworm): EGR_06657
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Entry
EGR_06657 CDS
T05553
Name
(RefSeq) THO complex subunit
KO
K13174
THO complex subunit 5
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EGR_06657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_06657
03041 Spliceosome [BR:
egl03041
]
EGR_06657
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
EGR_06657
Spliceosome [BR:
egl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EGR_06657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF1664
RNA_capsid
Motif
Other DBs
NCBI-GeneID:
36342372
NCBI-ProteinID:
XP_024349672
UniProt:
W6UCN6
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDGGLDVKKLVNDGKLDLKLFKQECSALKSSLDTTWQRKKSKQSVSGSTFGKHIIALKAI
NRRTQLRIKDLREATYQKKLAVDQKTRELQNLLYELEHLKESIQTCLGFRSLHEEISLIP
VEEYAKTVCTSEACKSEHQQTLDRLYWELQQRKKLFSFDIICFGRLHSNLNEISKSMAQV
KEKIATKQAYLDRIGGNLRNILESTRALDSEMGFKISENEETFQSAFALPPPLYIIYSKL
SAYIDRRVTVKIVGDSELARSVNSAASFNVDEVDADSSEVDDQDGLLLKRKKTHRKSKRI
GAEDEERPQHKTDSPHPLSVVVHIATGSDAKWANLQLTLTFTWLMRARLVTVKEEVHEIE
KLCPLSQTARDLLSSEGLLAHLQCGGEASRWEGGEAVAGGTGPASFLPLSSGDDDGGRAY
AWAQHLGGLQCLPYLDSARDTLFHASTSSSVTASSSATSVEPFGFIDSWFTALCRRLESR
MSLNAEIHAIESGVLNLSENQKPFFPISKDICLSTWDRVTFKDISTWPRAQTFMALDLIQ
PSDAIFKCQMAFRGKGVSQFLLRHGIVLTGFLESTVFIKK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgggttagatgtgaaaaagttggtaaacgatgggaagctggacctaaaactc
ttcaaacaagagtgttctgcccttaaaagctcccttgataccacctggcaacgcaagaaa
tcgaaacaatcagtgtctggcagcacttttggcaaacatatcatcgcattaaaagcgata
aatcgtaggactcagctcaggatcaaagacctccgtgaagctacttatcagaaaaagctt
gcggtcgaccaaaaaacacgggaacttcagaatctactttacgaattggagcaccttaag
gaatccattcaaacttgcttggggtttagatcactccatgaggagattagccttattccg
gtggaggaatacgccaaaactgtctgcacctcagaggcttgtaaatcagaacatcaacaa
acgctcgaccgcctttattgggagttgcaacagagaaaaaagttgttcagctttgacatt
atttgttttggtagattacattccaatcttaatgaaatctcaaaatcaatggcacaggtc
aaggaaaaaatagccacaaagcaggcatatcttgacaggattggtggaaacttaaggaat
attctagaatcaacaagggctcttgattctgaaatgggtttcaaaataagtgaaaacgaa
gaaacatttcagtctgcctttgctcttccgccgcctctctacatcatttattcgaaattg
agcgcttacattgacagacgggtgactgtgaaaattgttggagattcggaattagcgcgg
tcggtcaattcagcggcttctttcaatgtggatgaggtcgatgcagattcctcagaagtg
gatgaccaggatggactgctattaaaaagaaagaagactcatcgaaagtcgaaacgcatt
ggagcggaagacgaagaacggccacagcataagactgattcgccccaccccctttctgtc
gttgtgcacatcgccaccggatctgatgcgaagtgggcaaacctgcaactgacgctgacc
ttcacgtggctgatgcgagctagactcgttactgtcaaggaggaggtccatgagattgaa
aaactatgtcctctctcacaaacggcaagggaccttctctcgtcggaggggctgctggcg
cacttgcagtgcggtggggaggcttcacgttgggagggcggggaggcggtagccggcggt
accggaccagcttcgttccttccgctgagcagtggtgatgatgacggcggtcgtgcctat
gcatgggcgcagcacctggggggtctccagtgcctcccctacctcgactccgctcgcgat
actctttttcacgcttctacttcttcttctgtcactgcctcgtcgtccgcaacctcagtt
gagcccttcggattcatcgactcctggtttacggctctttgtcggcgtcttgaatctcgc
atgtctctcaatgctgagatacacgcaattgaaagtggtgtgctcaatctctcagagaac
cagaaacccttcttccccatcagtaaggatatctgtttgagcacgtgggaccgtgtgact
ttcaaagacataagtacatggcctcgtgctcaaactttcatggcactcgatttgattcaa
ccatcagatgccattttcaagtgccaaatggcctttcgcggaaaaggtgtttcacaattt
ctcttgcgtcacggcattgttctcactggatttttagagtctaccgtatttataaaaaag
taa
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