Echinococcus granulosus (hydatid tapeworm): EGR_06711
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Entry
EGR_06711 CDS
T05553
Name
(RefSeq) General transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03022
Basal transcription factors
egl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EGR_06711
09124 Replication and repair
03420 Nucleotide excision repair
EGR_06711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_06711
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_06711
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EGR_06711
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EGR_06711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
36342426
NCBI-ProteinID:
XP_024349620
UniProt:
W6UXX2
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MCAKKVAESAACIFDYLKTLDANDLDELYSHPPTCLIVFRELEELAKQIVHRLLFLEQAI
PKSIITGWVPKGSQGLLSQACKDLSDLCVWHSIDSDSARGSWRLNKKFQESMKVSLFGGG
PQLLSDFGSTAAEKHPKDAEFLDNYASERWDSILHFMVGSDSAEVGTCVRDVLLLSGLMK
RGGPDLSMGITQRGFQFLLMDRPTQVLRFMLHYFDYLKGNQMHIIEALHFVFQLSFLSFG
KSYPISMLSQTQQDLLQHMRELGLAYQRKRTAPRFYVTRLALSLAFGSPAALNSLRGSVD
AEPDALFSANRLPTGVSQRGSRGSGTGTGDTSDIGYILVETNFRLYAYTDSLLKTALLSL
FSKIRVRYPNLVVADITRDSVREALLRGISANQPTILPPTLVDQIRLWELERDRLFFQEG
CLYEQFAKNTDFEMSNGYLLWECPERRVMVVSKAGHDDVRAFWKQKRPV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctaagaaggtggccgaatccgctgcttgtattttcgattatctaaaaaccttg
gatgcaaatgacttagatgaattatacagtcatccaccaacttgcctcattgtatttaga
gagctcgaagaactcgcgaaacagatcgttcatcggttgctctttcttgaacaagcaata
ccaaaatcaataatcactggatgggttccaaaaggttcacaggggcttttgagtcaggct
tgtaaagatttgtccgatttgtgtgtatggcacagcattgacagtgacagtgctcgggga
tcctggaggcttaataaaaagtttcaagaatcaatgaaagtgtcactttttggcggagga
cctcaattattaagtgattttggttcaactgctgcggaaaagcatccaaaggatgcggaa
ttcttggataactatgcatctgaaaggtgggattctattttacatttcatggtcggatca
gactcagctgaggtgggtacctgtgtcagagatgtgcttttactgtctggattgatgaaa
agaggaggtcctgacctttcaatgggtattacacaaaggggatttcagttcctcctcatg
gacaggccaacacaagttcttagatttatgctgcattattttgattaccttaagggaaat
cagatgcacataatcgaggcacttcactttgttttccagttgagcttcctctcatttggc
aagagttatcctatcagtatgctgtcacagacacaacaagatctgttgcagcacatgcga
gagctgggtttagcttaccaacgcaaacgcactgcccctcggttctacgtgactcgttta
gcactgagtctcgcttttggctccccggcagccctaaattctttgcgtggctctgttgat
gcagaacctgatgctctcttctcggccaatcgtcttcccactggagtcagtcagcgtggc
tctaggggcagtggcactggtaccggagacacatcggatatcggctatattcttgttgag
acaaactttcgactttacgcctataccgattcacttctcaaaacagctttattgagcctt
tttagtaaaattcgcgtgcgctaccctaacttggtggtagctgacatcacccgagactcc
gttcgagaggctctgctgagaggaatcagtgccaatcaaccaacaattctaccaccgaca
cttgtggatcagatccgtctctgggagcttgaacgagaccggcttttcttccaggagggt
tgcctttatgaacagtttgctaaaaataccgactttgagatgagtaatggatatctattg
tgggaatgtccagaacgtcgggtcatggtcgtctctaaagctggccacgacgacgttcgc
gcattttggaagcagaagcgacccgtgtaa
DBGET
integrated database retrieval system
