Echinococcus granulosus (hydatid tapeworm): EGR_07443
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Entry
EGR_07443 CDS
T05553
Name
(RefSeq) Replication factor C subunit
KO
K10754
replication factor C subunit 1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03030
DNA replication
egl03410
Base excision repair
egl03420
Nucleotide excision repair
egl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGR_07443
03410 Base excision repair
EGR_07443
03420 Nucleotide excision repair
EGR_07443
03430 Mismatch repair
EGR_07443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egl03032
]
EGR_07443
03400 DNA repair and recombination proteins [BR:
egl03400
]
EGR_07443
DNA replication proteins [BR:
egl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EGR_07443
DNA repair and recombination proteins [BR:
egl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EGR_07443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA_lid_RFC1
AAA
AAA_22
AAA_5
AAA_30
AAA_16
BRCT_2
RuvB_N
AAA_19
nSTAND3
PTCB-BRCT
AAA_7
RCF1-5-like_lid
AAA_18
Motif
Other DBs
NCBI-GeneID:
36343158
NCBI-ProteinID:
XP_024348898
UniProt:
W6UHX8
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MPDSKRGIICDDSSSESEFQSPKLKRKHKRSHTIANPSFTNKEMDLEVIPKKRTSQTSKR
KIPTFEEGEAGEDPYQHAHRRSPKRRKSIFALDLGDTEAEGPRGKVQLTFEESLRKAEMK
KKARGPSKSPKTLHDFFSVPKVTDQPKKESKRAISVDDFFASLSHKTPPQRKEPVALVPE
TPTTPQSGRKTDDDEICLSASMVGKPLMPSPALLRREKRHSVSKVKDSPVSKDVLKTAQV
SHDVRKEERPSTSPVGDSYASKDVSKTPPEKRSKDTHKKRRGFVHKVDENSAAKTVPETP
PIKTSSRTTTPKKKLVPSAATPETEKSPSTITPKQGSSGGRPYFWKLQNREGPQALGSRL
IPKNTSTCFANKTFVITGVLECIEREEAERLIQRGGGRVTQAVSKRTSYLVVGRDSGASK
LNKAVSLGTPQLTEEAFFDLVDRGFGKVDAGEEGDDNCDIALSLTPSSTISGRLLTPPQK
GKKVKDEDNQLVLLTDRPMIPSPSLTKTAVTVPLVQELWVEKYRPRTRKELVGQNGAASP
ANRLYAWLSSWQEDYATGRKAKSYSSAPPWAVGGSSDTGAWARAALLSGPPGVGKTSTAS
VVCAELNLATIEMNASDTRSKRSLQEEVVQALDMRSLSGSFDLSSAKTLALTSHVLIMDE
VDGMAGNEDRGGMLELIGVIKTSKVPVICLCNDRQSPKWPIEKGSLPESSLVGLIDLSLW
SQSQIRSLANYCLDLRFHRPRVEQIKAAVLSMACREGVNVSSAALNEIISASNHDLRQVI
NSVQMWCMNGDHHKTDVAEADITANAAAAYKNLRLGPFEVIRKVFATNIDGKPVSFTEAM
DLFFQDYSLGPLFVQENYLNVRPVAANGNPQQTLDLLAEAAVDIAQGDIVSRVVQSTGGW
SLLPTQAVFASLRPGRLLRGSLPGGPGAISSPAWFGRNSTQTKNTRLLAELSQHMRLSTH
GGATDSRSLLLDYLHPLAVRLSAPLKEGDINSVLECLDAYQLLREDMDSLVELTTWQGRP
GLMKNIDAKVKSALTRTYNKSVHKVPYATELVGGGRKKRRKQGEASSEVTLEEGDEADQP
LEEESEESSVEEEEEIRKLARVVSYQEDDRENVLGCGIFKRKTSEETV
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcgaagagagggataatttgcgatgactcgagttcagaaagtgaattccag
tcgccaaaattgaagcggaagcataaaagatcgcacactattgctaatcccagttttact
aacaaagaaatggatctagaagtcatccccaaaaaacgcacttctcagacatcgaaacgt
aagatccctacatttgaagagggtgaagctggtgaggatccgtaccagcatgctcatcga
cgctctccaaagcgtcgaaaatcaatttttgcgttggaccttggtgatacagaggcagag
ggtccaaggggcaaggtgcaattgaccttcgaagagagtttgaggaaggcggaaatgaaa
aagaaggctagagggccatccaaatctcccaaaactcttcatgatttcttttcagttcca
aaagttactgatcagccaaaaaaggagagcaagagggcgatctcagtggatgatttcttt
gcatcattgtctcacaagacaccaccacagcgaaaagagcctgttgctttggttcccgag
actccgacaacacctcagagtggcagaaaaacggacgatgatgaaatctgtctttccgct
tctatggttggaaaaccactgatgccatcacctgcgcttctgcgcagggaaaagaggcac
tctgtgagcaaggtgaaggacagccctgtctcgaaagacgtgctaaaaactgcgcaggta
tcccatgacgtacggaaggaagagagaccatccacaagcccagtgggtgatagttacgcc
tccaaagatgtctcaaagacgccacccgaaaagagatcgaaagatacacataagaaaagg
agggggttcgtgcacaaagtggacgaaaattctgccgcgaaaactgtgccggaaacgccg
ccgataaagacatcgtcgagaaccactactccgaagaagaagttagtaccttcagccgcg
actccggaaacggagaaatcaccatcgacgataacacccaaacaagggtcgagtggtgga
aggccctatttttggaagttgcagaatcgtgaagggccccaggctcttggctctagactt
ataccaaagaacacctcgacctgcttcgcgaataagacgtttgtgattaccggcgtgttg
gaatgcattgagcgagaggaggcagagcgcctaattcaacgcggtggcggtcgggtgacc
caggcagtgagcaaacgcacctcctatctggtggtgggtcgagactctggtgccagcaag
ttgaacaaggccgtcagtctgggcactccgcaactcactgaggaggccttttttgatctc
gtcgatcgtggtttcggcaaggttgacgctggagaagagggtgatgacaactgtgatatt
gctctcagtctcacaccatccagcaccatttcggggcggctgctgactcctcctcagaag
gggaagaaagtgaaggatgaagataatcaactggttctgctgacagatcgacctatgatt
ccatctccatcactaacgaagacagcggtaacagtgccgctggttcaggaattgtgggtg
gagaagtatagaccgaggaccaggaaagagttggtgggacagaatggggctgctagtccg
gccaatcgtctctacgcgtggttgtccagttggcaggaggactatgcgactggtcggaaa
gcaaaatcctactcgtcggcaccgccgtgggcagttggtggatcgagcgacacgggcgct
tgggcacgtgcagcgctgctttcgggtcctccaggggtgggcaaaacatcaactgcctca
gtggtgtgcgcggagttaaatctcgctaccattgagatgaacgcctccgacacgcgatca
aaacgctctctacaggaagaggttgttcaggccctggacatgcgctccctctctggatct
tttgacctctcaagtgcaaaaaccttggcactaacttctcacgtcctgatcatggacgag
gtggacggaatggcgggcaacgaagatcgaggcggaatgctggagctaattggagtcatc
aagacctccaaggtgcctgtcatctgcctctgtaatgatcgacaatcgcctaagtggccc
attgaaaagggttcactacctgagtccagtcttgttgggttaattgatttgagtctctgg
tctcaatctcagattcgttccttggctaactactgtctggacctccgctttcatcgtcca
cgcgtagaacaaatcaaagctgccgtgctctccatggcctgtcgtgagggtgttaacgtc
agttcggcggctctcaacgagatcatcagcgcaagtaatcatgatttacggcaggttata
aactcagttcaaatgtggtgcatgaatggtgaccatcacaaaaccgacgttgccgaggct
gatatcactgccaacgccgctgcagcttacaaaaacctccgattgggtcctttcgaagtc
attcgtaaggtcttcgcaaccaacattgatggcaaacccgtctccttcaccgaggcaatg
gacctcttttttcaggactactcactcggtccactctttgtacaggaaaactacctcaac
gttcgtccagtggctgcgaatgggaaccctcagcaaactctggatcttcttgctgaagcc
gcagtagatattgcacagggtgatatcgttagtcgagtggtgcaatcaaccggcgggtgg
tcattgctaccgacacaagctgtgtttgcaagccttcgaccgggtcgcctgctgagggga
tcgttgcctggaggccctggagcgatctcctctccagcgtggttcggtcggaactccacg
cagacgaaaaacacgcgactgttggcagagttgtcgcagcacatgcgactttcgacgcat
ggcggggcgacagattcgcggtcgctgcttttggactacctgcatccattggctgtgcga
ctgtcagcaccgctgaaagaaggtgatatcaacagcgtgctggagtgcctagacgcctac
cagctgttgcgcgaggatatggacagtttggttgagttgaccacgtggcagggtcgtcca
ggtctcatgaagaacatcgacgccaaggtgaagtccgcattaacgcggacttacaacaag
tcggtacataaggtaccctatgcaacggaactagtcggcggaggcagaaaaaaaagacgg
aaacaaggcgaggcatcgtctgaagtcacactggaagagggagatgaggctgatcaacca
cttgaagaagagagcgaggagagtagtgtggaagaggaagaagaaattcgaaagttggct
agggtggtgagttatcaagaagacgatcgcgaaaacgtcctcggctgcggaatcttcaag
agaaaaaccagcgaagaaaccgtctag
DBGET
integrated database retrieval system
