Echinococcus granulosus (hydatid tapeworm): EGR_07546
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Entry
EGR_07546 CDS
T05553
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03082
ATP-dependent chromatin remodeling
egl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EGR_07546
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EGR_07546
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egl01009
]
EGR_07546
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egl03021
]
EGR_07546
03036 Chromosome and associated proteins [BR:
egl03036
]
EGR_07546
Protein phosphatases and associated proteins [BR:
egl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
EGR_07546
Transcription machinery [BR:
egl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EGR_07546
SWI/SNF complex
EGR_07546
Chromosome and associated proteins [BR:
egl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EGR_07546
PBAF complex
EGR_07546
SWI/SNF complex
EGR_07546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
CRC_subunit
Motif
Other DBs
NCBI-GeneID:
36343261
NCBI-ProteinID:
XP_024348800
UniProt:
W6UVW8
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MQPALRYGEKPIEFQLETDGEFYYLASEVGRYLRLFRGELLKRYPNLWKRLITSEERDKL
IAMGLATPVTALNAVILRAIEVDELIGGSEDRFKSFEPGLTGSIAPSAIRPNLASSTASS
LSGSVFGSTAATPSSTTPMAVTGTATSAEGFTSSSGTPLKPGGSGSSGGGVGVGGVGSSS
VSGGGSGGSGSRSAGSAAGRWVSSVPNTSFHLDSVPCPTPIGAGASATRSRPNKVSSKVS
NFPICLDDSDPVAYHENAQQPEHLVPIRLDIEFDGVKLRDCFTWNRTEQLITPEQFAEIL
CDDLDLNPISFVPAIAQAIRQQVAAHPVENILSGQTDTRVIVRLNIHVGNMSLVDQFEWD
LSEPANSPEQFATRLCAELGLGGEFVTAVAYSIRGQLAWHQRLYAFTLDTWNCVFSESPL
PTIDVVFRSPNEADQWSPAVEVLTDAEMEKKIRDQDRNTRRMRRLANTQPGW
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggccttgcgctatggcgaaaaaccaattgaatttcagttggaaactgatggg
gaattttattaccttgcttccgaagttggtcggtatctgcgtcttttccgtggtgaactc
ctaaaacgctatcccaacttatggaagcgtctaatcacttccgaagaacgggataagctc
attgctatgggtcttgcgacgccagttacagctctcaacgctgtcatcctgcgagctatc
gaagtcgacgagttaatcggaggcagcgaggatcgtttcaagtccttcgagcctggtctc
actggatccatcgctcccagcgcaattcgacctaatttggctagctcgacggcgtcctcc
ctctccggcagtgtcttcggttctaccgccgcgacaccatcgtcaactactcctatggca
gtcactggcacagcgacaagtgcagagggttttactagttcctctggcaccccgcttaag
ccgggcggtagcggcagtagtggtggtggagtaggcgtcggcggtgttggtagcagcagc
gtcagcggaggtggaagcggcggtagcggttcgcgtagtgcaggttcggctgcgggtcgg
tgggttagttctgtgccaaacacctccttccatctggactcagtgccctgtcctacacca
atcggtgcgggagcgagtgcaactcggtcaagaccaaataaggtgagcagcaaagtttcc
aacttcccaatctgtctggatgactcggatcctgtggcgtaccacgagaacgcccagcag
ccggagcacctagtccccatccgattggacattgagttcgatggggtgaagctacgcgat
tgctttacgtggaaccgtacagagcagctgatcactccggagcagtttgcggagattctc
tgtgacgatctcgacctcaatccgatctcctttgtgcctgctattgctcaggccatccga
caacaggtggcggcgcacccagtggagaatatcctctccggccagacagacactcgtgtg
attgtgcgtctgaatatccacgtgggcaacatgtcgttggtggatcagtttgagtgggac
ctttccgaacccgccaactcgcctgagcagttcgctacaagactctgtgctgaactgggt
ctaggtggagaattcgtcaccgctgtcgcctacagcattcgaggtcaactggcctggcac
cagagactctacgcttttactttggacacttggaattgtgtttttagtgaatcaccactg
ccgacaatcgatgtagtgttccgcagtcccaatgaagccgatcagtggagcccggctgtt
gaggtgttaacagacgccgagatggagaagaagatccgcgatcaggatcgtaacacgcga
cgtatgcgacgtttggccaacacgcagcccggttggtga
DBGET
integrated database retrieval system
