Echinococcus granulosus (hydatid tapeworm): EGR_08421
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Entry
EGR_08421 CDS
T05553
Name
(RefSeq) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EGR_08421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egl03041
]
EGR_08421
03009 Ribosome biogenesis [BR:
egl03009
]
EGR_08421
Enzymes [BR:
egl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EGR_08421
Spliceosome [BR:
egl03041
]
Complex A
U2 snRNP components
U2 related factors
EGR_08421
Complex B
EGR_08421
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
EGR_08421
Ribosome biogenesis [BR:
egl03009
]
Eukaryotic type
90S particles
Helicases
EGR_08421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
AAA_29
ABC_tran
Flavi_DEAD
AAA_23
Motif
Other DBs
NCBI-GeneID:
36344136
NCBI-ProteinID:
XP_024347889
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSSRHRIDIGGSHRKSKFSDCDNSSENSRSRDRSPIGVVSNSSIQINPHTGLQYSQRYFD
IFRKRIQLPVWEYKDQFFKVLTDNQVTVLVGETGSGKTTQIPQWCLEWLKIRYSSRKCVA
CTQPRRVAAMSVAQRVSEEMDCQLGNQVGYSIRFEDCTSNNTVLKYMTDGMLLREGMSDP
LLENYGVILLDEAHERTLATDILMGLLKEIIGQRPDLKIVVMSATLDAGKFQDYFDNAPL
LTVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHVCEESEGDILLFLTGQEEIEEACKRI
QREVESLGADVGELRCIPLYSTLPPNLQQHIFDPPPPRRKNGAVGRKVVVSTNIAETSLT
IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTERA
YRQEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL
DDDGNLTDLGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPADAKKA
ADEAKMRFAHIDGDHLTLLNVYHAFKQNQEDPQWCYDNFINLRSLKSADNVRVQLSRIMD
RFSLRRSSTEFASRDYYLNIRKALVSGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDH
KPEWVLYNEFVLTTKNYIRTVTEVKPDWLIRIAPQYYDMTNFPECEAKRILERCAHRIAQ
RQQKKQQEEENKSEEAQH
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcgtcatcgtattgatattggtggaagtcacaggaaatcaaagttttctgat
tgtgataattccagcgaaaactctcgttcccgtgaccgctcaccaatcggtgttgtatct
aattcatccattcagataaatccccatacaggtctccagtatagtcaacgctactttgat
atatttcgaaagcgaatacaactgcctgtatgggaatataaagatcaattcttcaaagtc
ctaacagacaatcaagtgactgttcttgttggtgagactggctcaggaaaaacaacacaa
attccacaatggtgtttggaatggttaaaaattcgctattcgtcaagaaagtgtgttgca
tgtactcagcctcgtcgcgttgcagcaatgtccgttgcacagcgtgtgtctgaggaaatg
gactgccagctcggtaatcaagtcggttacagtattcgatttgaggattgcacctcaaat
aataccgtacttaagtatatgacagatggtatgctacttcgtgagggcatgtccgatcca
ctcttggagaactacggggttatccttttggacgaagctcacgaacgtacacttgctacg
gatatacttatgggcctactgaaagaaatcataggtcagcggcctgacctaaagatagtt
gtaatgagcgcaacccttgacgctggcaaatttcaggattattttgataatgcacccttg
ctgaccgtgcctggcagaactcatccggtggagattttctacactccagaacctgagagg
gactatctggaggcagcgattcggacggttattcaaatacacgtgtgcgaggagagtgag
ggcgacatcctcctctttctaactggacaagaagaaattgaagaggcttgcaaacgcatc
caacgcgaggtggagtctctcggagcagatgtgggtgaattgaggtgcataccactatac
tccacgcttccgccgaatttacagcagcatatctttgatcctccaccaccacgtcgtaaa
aatggtgcagttggcagaaaggtggttgtatctacaaacattgccgaaacctcccttacc
attgatggagttgtgtttgtgattgatcctggctttgcaaaacagaaggtgtataatcca
agaattcgtgtagaatccctccttgtcacagcaatcagtaaggcttccgctcaacagcga
gccggacgagctggacgaacacgcccaggcaagtgtttccgtctctacacggaaagagcc
tatcgtcaggagatgcaggacaacacctatccggagatcctccgctccaacttggggacg
gtggtgctgcagctcaaaaaactaggcattgatgatcttgttcactttgattttatggat
ccaccagctccggagacgcttatgcgagcactggagttgctaaattacttagcagctcta
gacgatgacggcaacctaacagatctcggtagtatgatggcggaatttcctctggatcca
cagcttgcaaagatggtgatcgcttcttgtgattacaactgctccaatgaggttctgagc
atcactgccatgctgtcagtaccccagtgctttgttcggccagccgacgcaaaaaaagct
gctgatgaagcaaaaatgcggttcgcccatatcgatggtgatcatctaaccctgcttaat
gtctaccatgcattcaagcaaaatcaagaggatcctcagtggtgttatgacaacttcatc
aacctccggtcactcaagtccgctgacaatgtacgtgttcaactgtcacgcataatggac
cgattctctttgcggcgttcgagcaccgaattcgcgtctcgggactactacctaaatatt
cgcaaagccctggtctccggcttcttcatgcaggttgcgcatttagagcggacaggtcac
tacttgacggtgaaagacaatcaagtggtacagctgcacccctccactgtccttgaccac
aaacccgaatgggtgctctacaatgaatttgttcttaccaccaaaaattacatccgaaca
gtcacagaagttaaaccggattggttgattcggatagcaccgcagtactacgatatgacc
aacttccctgaatgcgaggcaaaacgcattctcgagcgatgcgctcaccgaatagcccaa
cgtcagcagaagaaacagcaggaggaggaaaataaatccgaagaggctcagcactaa
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integrated database retrieval system
