Echinococcus granulosus (hydatid tapeworm): EGR_08512
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Entry
EGR_08512 CDS
T05553
Name
(RefSeq) Collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl04382
Cornified envelope formation
egl04512
ECM-receptor interaction
egl04518
Integrin signaling
egl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
EGR_08512
04518 Integrin signaling
EGR_08512
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
EGR_08512
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
EGR_08512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egl04147
]
EGR_08512
00536 Glycosaminoglycan binding proteins [BR:
egl00536
]
EGR_08512
Exosome [BR:
egl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
EGR_08512
Glycosaminoglycan binding proteins [BR:
egl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
EGR_08512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
36344227
NCBI-ProteinID:
XP_024347847
UniProt:
W6U8E6
LinkDB
All DBs
Position
Unknown
AA seq
1751 aa
AA seq
DB search
MSRHRQPCVSSLDSTGEFTRTSFHLPALLLCLSLLLQPSQAAVACPNAICEECSCEGNPG
PQGEPGPQGHMGLPGSIGPRGSRGPPGTRGLQGLPGYPGEPGRKGIMGDKGQPGMPGTDG
LKGMPGIKGPKGFPGDPGCCGIKGLPGFPGLPGPDGYDGLQGPRGLKGEKGEKGETIVGD
GTAVRGPPGMKGSRGPQGPVGPRGPDGERGRPGVQGPKGFMGPAGDHGEQGPKGPKGKTP
SPSIQYAQRGEKGEKGYKGASYEKPPGIAGFPGVPGQPGPQGDPGPPGKKGKTGPSGVSG
ASGRPGIDGMQGPPGPEGPRGVKGEKGYPGRTGPKGEQGPKGDTITTEGTLPGPDGERGE
MGPPGPPGDEGPMGEKGLEGERGDPGEPGPKGEPGPGYGTIVPGEPGPKGERGLPGVDGK
RGKTGPPGPRGVKGVKGLPGQDLVGPKGERGPPGVPGTQGPAGERGPEGPQGPPGDPGED
GPSIDGVKGPPGVKGLPGSPGLRGRPGPRGPTGPQGDCAYCPDGLPGPRGPKGFTGRPGR
PGPDGVDGAPGAKGLPGFQGPDGPMGPAGRKGAKGEPGPMGDRGPPGEPGRIEFINQTIT
EAPRGQDGPPGRPGPRGLTGPKGFPGQQGPRGPLGPKGETGAKGLPGFSGPQGVQGPPGD
PGPDGRVMRAQKGEPGPPGRDGFPGPKGEKGERGPDRIIEQLYEHLKGEPGPKGEKGEPG
VPGFPGAQGAPGEKGLRGTDGKDGKKGYPGDVGPPGPPGEKGRRGPKGQPGLPGSRGPDG
RQGPQGPMGPKGQRGPEGERGETGLPGPDGGSEPGLRGPRGEPGEKGRKGESGAPGLQGL
PGEKGPKGIAGVAGRPGQPGPKGVKGEPGIPGEVLYGPKGPKGARGPPGLPGLRGPKGDK
GPDDYISEGMKGDKGQKGQAGQVGPPGADGPPGPKGKQGPPGPIGKDGPQGEAGDPGEMG
PVGPPGRQGPKGPPGLSGEIGPEGPVGPPGPAGPPGPKGDPGPKGYPGEKGDVGPPGSGS
PGVKGEKGQPGRMGIPGDPGYDGIPGPKGNPGPPGQSIQGPPGPRGPKGEQGLQGPPGAD
KPPARKGVPGPSGPKGPRGPKGEPGSPGPEGRPGPRGPIGPIGDEGPQGRPGLPGPAGPK
GSKGRPGVQYGQPEPGDKGERGPPGPPGDIGVTGSPGAKGEPGPMGLPGIPGPQGFKGHP
GFQGKKGARGPEGPRGPDGLSGPRGPHGPRGPRGPPGPVGPKGERGPEGEPGDSMVGLPG
AKGEPGEPGPMGSPGIKGAIGVPGTRGRPGERGDPGPDLVGTKGQKGDRGVPGRPGPQGT
RGPKGPKGISYPQPGEPGPDGPPGPKGVKGERGPPGPVGQPGPKGERGSPGEPGQRGIPG
PDGRPGLDGRDGQPGPQGFKGEKGFRGPKGERGPMGMLGPKGEQGDRLSGEKGQKGQPGP
DGPTGEMGLRGPQGQPGPQGPTGEPGQKGEPAPMGPKGFEGPPGESGPRGPTGPKGDIGP
PGEPGLPGRVGDTRGNTGFLFAKHSQTMRIPECPSSTRKLWEGYSFLSMSGSERPHVNDL
ASPGSCLQMFNPIPFMFCEKQENCYFAQRNDRSYWLSTEDEPMMWNPVPVNESQRHISRC
VVCEAPSTLYAFHSQTLEIPKCPIGWQDMWVGSSFLMNTGYGAQGGGQQLASPGSCLPIF
RSHMFIECTAKGLCGFFEEHKNFWLRVMPSSMDEHMFGMVMGQVIKVRQSQDSVGKCIVC
MRTQPLVNYIV
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccacagacagccgtgtgttagctcattagattccactggcgagttcactcgc
acctctttccatctccctgctcttctcctctgtctttctctactcctgcagccttctcaa
gcagctgttgcctgtcccaatgccatttgtgaagaatgctcttgcgaaggcaatcctggc
cctcagggcgaacctggaccccaaggtcacatgggtctacctggatctataggtccgcga
ggttccagaggtccccctggtactaggggtctgcagggtctacctgggtatcctggtgag
cctggtcgtaaaggcatcatgggtgacaaaggtcagcctggaatgccaggaactgacggt
ttgaagggcatgccaggtatcaagggacccaagggtttccctggtgatccgggatgttgc
gggataaagggacttccaggctttcctgggctccctggacccgacggctatgacggcctt
caaggacctcgtggactcaaaggcgaaaagggtgaaaaaggtgaaacaatagttggcgat
gggacggctgttagagggcctcccggcatgaaaggctcgcgtggacctcaagggcctgtt
ggacctcgtggtcccgacggcgaacgtggtcgtcctggtgtacagggccccaaaggtttt
atggggcccgctggagaccatggtgaacagggccctaaaggcccaaagggcaagacccct
agtccatcaattcaatacgcccaacgaggtgaaaagggtgagaagggctacaaaggtgcc
tcctatgagaaaccgcccggtatagccggttttcctggagtccctggccaacctggtcct
caaggtgatcccggccccccgggcaagaaaggcaaaactggtccatcaggagtgtcaggc
gcttcaggtcggcctggtattgacggaatgcaaggtccaccaggtcccgaaggtcctcgc
ggtgtaaaaggtgagaaaggctatcccgggagaactgggccaaagggagaacagggtcca
aaaggtgacaccatcaccactgagggtacacttcccggtccagatggagaacgtggtgaa
atgggacctcctggtcctcctggtgatgaaggtccgatgggggaaaagggtctggaaggt
gagcgtggagatcccggcgaaccgggtcccaagggtgaacctggcccaggctatggaacc
atcgttcctggagaacctggacccaagggagaaagaggtctccctggagttgatgggaaa
cgtggaaaaaccggacctcccgggcctcgaggtgttaagggtgtcaagggtttacctggc
caagatttagttggtccaaaaggtgaaaggggccctcctggtgttcctggaacacaagga
cctgccggtgagcgaggtcctgaaggtccacaaggcccaccaggagaccctggtgaagat
ggacccagcatagatggggtgaaaggcccaccaggtgttaaaggtttaccaggtagccca
ggtctccgtggacgaccgggtcctagaggtccaactggtccccagggcgattgtgcctat
tgcccggatggtcttccaggaccacgtggtccaaagggctttactggccgtcctggacgt
ccaggcccggacggtgtagacggcgctcctggtgccaaaggtcttccaggcttccaaggt
cccgatggtcctatgggtcccgcaggcaggaagggtgccaaaggtgaaccgggcccaatg
ggcgatcgcggacctcctggcgaaccgggccgcattgaattcatcaatcagaccatcact
gaagccccaagaggacaagacggtcctccaggcagacctggaccccgtggcttaactggc
cctaaaggattccctggacaacagggtccacgtggacctctaggcccaaagggggagact
ggtgcaaagggtctcccaggtttcagcggacctcaaggtgttcaaggaccacctggtgat
ccaggtcccgatggaagagttatgagagctcagaaaggtgaacccggtccacctggtcgt
gacggattccccggtccgaagggtgaaaagggtgaacgcggtcctgaccgaatcatcgaa
cagctctacgaacacctcaaaggcgaacctggaccaaagggtgaaaaaggtgaacctgga
gttcctggattccccggtgctcaaggtgcacctggtgaaaagggtcttcgtggaaccgac
gggaaggacggaaagaagggctaccctggtgatgtcggacctccgggtccacctggggag
aagggtcgtcgtggacccaagggccagcccggattgcctggtagccgaggtcccgatgga
cgtcagggaccgcagggtcctatgggacccaaaggtcaacgcggacctgaaggagaacgc
ggcgaaaccggtcttcctggtcctgatggtggctctgaacctggtctcaggggtccacgc
ggtgaacctggtgaaaagggtcgcaagggtgaatctggtgctcctggtcttcaaggtctt
ccaggagagaagggacccaagggaatcgctggcgttgctggacgtccaggacaacctgga
ccgaaaggtgttaaaggagagcctggtattcctggagaagtgctctacggtcccaaagga
cccaaaggtgctcggggtcctcctggattgcccggcctgaggggccctaagggcgataaa
ggtccggatgactatatcagtgagggtatgaaaggcgataagggtcagaagggacaggcc
ggccaagtaggacctccaggtgcggacggtcctccaggtccgaagggcaagcagggtcca
cctggaccgattggcaaggacggcccacagggagaagctggagatcccggcgaaatggga
cctgtgggaccacctggacgtcaaggacctaaaggaccacctggtctttctggagagata
ggccctgaaggtcccgtaggacctcctggccctgctggtccaccgggacccaagggtgac
cctggtccaaaaggctatcctggcgagaagggtgatgtgggaccccctgggtctggctca
cctggagttaagggtgagaagggccagccgggtcgcatgggaattcctggtgatccaggt
tatgacggtatcccaggacccaagggtaacccgggtccacctggccaatccattcaggga
ccacctggacctagaggtcctaaaggtgaacagggtttgcaaggtccacctggtgccgat
aaaccgcccgctagaaaaggagtccctggtccctctggaccaaaaggtccacgaggaccc
aagggcgaacccggcagtccaggtccagaaggtcgtccaggaccacgcggacccatcggc
cctattggtgatgaaggacctcagggtcgtcctggacttccaggtccagctggtccaaaa
ggttcaaaaggccgaccaggagttcagtacggtcaaccagaaccaggcgacaagggagaa
cggggacctccaggtccacctggagatattggagtaacaggatctccaggtgctaaaggc
gagcccggtcccatgggacttccaggcataccaggtccacaagggttcaagggccatcct
ggattccaaggcaagaagggcgctcgaggacctgaaggacctcgggggccggacggcctt
tcaggaccacgtggacctcatggacctcgtggaccaagaggaccgcctggacctgttggt
ccaaagggagaacgcggaccagagggcgaacctggagattcaatggttggtctgcctgga
gctaaaggtgagcccggagaacccggccccatgggttcacctggcatcaagggtgcgatt
ggagtcccaggaactcgcggacgtccaggtgaacgtggtgacccaggtcctgaccttgtc
ggtaccaagggtcaaaaaggtgatcgcggtgttcctggcagaccaggaccacaaggaacc
cgtggacccaagggtcccaagggtatctcatatccacaacccggagaaccgggtccagat
ggacctcccggaccaaagggagtcaagggtgaacgtggaccaccaggaccagttggacag
cctggccccaagggtgaacgtggatcccctggagagcccggacaacgtggtatacctgga
cctgatggaagaccaggacttgatgggcgcgacggacaaccaggaccacaaggcttcaaa
ggtgagaagggcttccgtggacccaagggtgaacgaggtccaatgggtatgctgggtcca
aagggtgaacagggtgatcgcctttcgggtgaaaagggccagaagggtcaaccaggtccc
gatggacctaccggtgagatgggtttacggggtccacagggtcaacccggtccccaaggt
cccaccggcgaacccgggcaaaagggtgaacctgcaccaatgggtccgaaaggctttgag
ggtccacccggtgagtctggaccccgtggaccaactggacccaagggtgacatcggtcct
ccgggtgaacctggtcttcctggtcgtgttggtgacactcgaggcaacactggcttcctc
tttgccaaacatagtcagacgatgcgtattcccgaatgtccgtcgtcaacacgtaagctc
tgggaaggctactccttcctgagtatgtcggggtcggaacggccacatgtcaacgaccta
gcgagcccaggctcctgcctgcagatgtttaatccaattcccttcatgttctgtgagaag
caggagaactgctactttgcccaacgcaacgatcgctcctactggctaagcactgaggat
gagccgatgatgtggaaccctgtaccagtgaatgagtcgcaacgtcacatcagtcgatgt
gttgtctgtgaagcacctagcacgctctatgccttccactcgcagacactggagattccc
aagtgcccaattggttggcaggatatgtgggtgggaagcagtttcctcatgaatactggc
tacggagctcagggtggtgggcagcagttggcttcaccaggcagctgtctgcctatcttc
cgctcgcacatgttcattgagtgcaccgcaaagggtctctgcggcttcttcgaggagcac
aagaacttttggctacgcgttatgcccagctccatggacgaacacatgtttggtatggtg
atgggacaagtgatcaaggtgaggcagagtcaggactccgttggaaagtgcatcgtctgt
atgcgcacccaaccgctggtcaactatattgtctaa
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integrated database retrieval system
