Echinococcus granulosus (hydatid tapeworm): EGR_08623
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Entry
EGR_08623 CDS
T05553
Name
(RefSeq) Collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl04512
ECM-receptor interaction
egl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
EGR_08623
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
EGR_08623
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egl04147
]
EGR_08623
00536 Glycosaminoglycan binding proteins [BR:
egl00536
]
EGR_08623
Exosome [BR:
egl04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
EGR_08623
Glycosaminoglycan binding proteins [BR:
egl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
EGR_08623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
36344338
NCBI-ProteinID:
XP_024347697
UniProt:
W6U827
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MSHQKPNHQEDRLHSSYLATVAIALLFSLVASASAQIPWQIDPARCQLLCTPDQCQCVGI
RGPRGPPGEVGPVGAWGPPGDVGMPGVPGERGDRGYPGAPGLQGRKGEPGVQGPPGYAGI
HGLQGHPGRRGIKGARGATGCEGPRGPDGSPGIAGPSGIQGPPGERGPRGPKGNPGYMNA
GPPGPPGQSGDVGYMGPPGFRGPPGYDGPIGERGPMGPKGYKGAIGPRGPPGRDAPTITI
EGQKGDQGFRGVPGRDGRPCEVLELLSGPRGRSGYPGPRGPKGDRGERGTEGFQGPDGYP
GLLGEKGLPGREGDRGQVGDIGDPGRVGEPGDRGFDGDMGRMGPAGAPGERGPPGVDGLP
GFRGPKGRPGSLRDCVGPRGRKGERGPPGAKGFLGYRGRQGPTGYKGPKGDPGPRGRPGP
PGRMCETGEMGLVGEKGETGLPGRRGEDGDPGYMGPQGPRGPDGLTPMYGPVGEPGIPGS
PGRVGPKGDPGLPGDRGDKGYRGTPTVGLPGPRGPSGDMGEPGRTGAPGLMGPAGEKGPR
APPCDACPSGEPGGRGETGEDGEPGQPGQPGQRGQDGDRGIPGARGLPGLPGLDGFRGPQ
GVAGIPGLKGEPGETGFVTLVNRQVIPGDQGDPGRDGLPGAMGDRGAMGPPGLPGFPGPR
GPKGRPGIDGMVGYPGLPGDKGEPGEPGEDGYGVKGAQGEPGDMGITGPPGRKGSRGGVF
DCPFVGPVYKKGEPGYRGPKGDTGSAGPHGQTGPQGTKGIQGLAGQRGSRGDRGPRGPSG
LPGDMGMPGSRGQDGREGPPGPMGVPGQPGIAGDPGYPGIVGEKGERGEPGDPGSRVGGS
PGEKGRPGLPGFPGDRGPPGRAGPMGVRGRPGPPGVSGIPGAPGRMGPPGEKGPQGLPST
RLPPGLPGLPGVQGPRGSVGSKGQRGPFGRCYGRGPTGDMGSPGDRGYSGMQGLRGPEGP
VGFSGFQGLSGRPGEKGERGARGPTGEPGRPGPTGPAGRRGYAGRSGRSGEIGLPGFYGQ
KGYMGLPGMSGPKGRRGRPGISRDGRPGVTGRPGLEGPKGEKGIRGVDGKDGKPGEPGRP
GVGSPGLPGAKGYRGPVGDPGPPGMDPIPGPVGDVGFMGRMGPKGPRGLPGPVGFTGREG
LPGKKGDRGEPGDDGLPGIAGDRGDEGYPGPPPSFMKGRKGYGGRPGPKGFTGPAGLHGG
IGPRGRPGIAGPSGRPGLRGLEGYPGLPGDTGTPGYPGRQGMNGSMGQPGDVGPPGFQGL
VGHQGPPGLKGAKGRPGFCPIPPPGPKGEPGPPGRIGPDGPQGDKGIAGLPGLKGTPGQP
RMGPEGRKGERGFDGQPGNAGLPGDQGDRGTPGYRANRGEPGDMGPPGLPGERGPIGLPG
KNGPPGYRGAPGKDGVKGKPGLPGISGRPGPDGPVGDPGEPGPRGFEGSRGPIGRPGYPG
PKGPKGKSGYGFVGRSGDFGEPGPQGERGYSGFQGTPGRTGPPGEKGYKGSAGYIPGPRG
PTGERGPPGDMGYQGIKGQRGPQGYRGPDGPNGTLGLGDGGYLFAVHSQKDTPPSCPEFT
HELYTGYSLVTLQGDDDSISMDLGSPSSCTRVFSIMPFASCFSSPPSGACHFNMRNGRSF
WLSTLEHYMTEPLPVERIQRYISRCVVCESRTNLVAFHSQRPYLEESCPPGWEHAWNGFS
MPMVVSAAVSGGVQPLHSPGSCLMNFRALPFIECNNHHGNCFHWQDGRSYWLRAMTFNEQ
FTKPAGATYKTDLLRQVSRCSVCRKSMEMLDSFMISSPRTPPYTLPAPSLSTFRRNLLFS
A
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaccagaagccaaatcaccaagaggataggcttcactcttcatacctcgctacg
gtggctatagccctccttttttccctcgtcgcttctgcctcagcgcaaatcccatggcag
attgatcctgcgcgatgccaattattgtgcacaccagaccaatgccaatgcgtcggaatt
cgcggtcccagaggaccaccgggcgaagtaggaccggtgggagcttggggacctcctggt
gatgtgggtatgcccggagtgcctggcgaacgtggtgatcgtggctaccctggtgctcct
gggcttcagggtcgaaaaggagaaccgggtgttcaaggtccacctggatatgccggcatt
catggtttgcagggtcaccctggaagaagggggattaaaggtgcacggggtgccactgga
tgtgaaggccctcggggtccagatggaagtcctggaatagctggaccctcaggtattcag
ggaccccctggcgaacgcggtccccgtggtccgaaaggaaaccctggatacatgaacgct
ggacctcccggtccaccgggtcagtcgggcgatgttggctacatgggtccacctggtttt
cgaggccctccaggttacgatgggcccatcggagagcgcggacctatgggtccaaagggt
tacaaaggcgcgattggaccacgcggtccacccggcagagacgcaccgacaattacgatt
gaaggacaaaagggtgatcaaggctttcgtggggtgcccgggcgtgatggacgaccttgt
gaagttctagaactcctctctggaccgcgtggccggtctggatatccaggaccacgcggg
ccgaagggagatcgtggagagaggggcacggagggatttcagggaccagacggatatccg
ggtcttctgggagagaagggtcttcccggccgtgagggtgatcgaggtcaagttggtgat
attggcgatccgggccgcgtcggtgagcccggcgatcgtggttttgacggtgatatggga
agaatgggtccagctggagctcccggtgaacgcggacctcctggagttgacggtcttcct
ggttttagaggtcctaagggtcgtccagggagccttcgggactgtgttggtcctcgaggt
cgaaagggcgaacgcggacctcctggcgcgaaaggtttccttggctacagaggtcgccaa
ggtcccacaggctacaagggtcccaagggtgacccaggtccccgtggtaggcccggacct
cctggtcgtatgtgcgagacgggtgagatgggactggtaggcgaaaagggtgaaactggt
ttgccaggaagacgcggagaggacggtgatcccggttacatgggtcctcagggtccccga
ggtccggacggtctgaccccaatgtacggacctgttggagaaccgggaatacccggttca
cccggtcgtgtaggccccaagggagaccctggtcttcctggcgatcgcggtgataagggc
taccgcggtacccccaccgtcggccttcccggaccccgcggtccttctggcgatatgggc
gaacccggacgcaccggtgcacccggtctaatgggcccggccggcgaaaaaggccctaga
gctccaccctgcgatgcctgcccctcaggcgagccgggtggaagaggtgagacaggagag
gacggagaacctggacagcccggccagccgggtcaaagaggccaggacggcgaccgtggc
atccctggggctcgcggactgcccggtctgcctggtcttgacggttttcgaggtccacaa
ggagttgcgggaattcccggtctcaagggtgagccgggtgaaactggttttgtgacactt
gtcaatcgtcaggtcatccccggcgaccaaggcgatcctggaagagacggattgcccggt
gctatgggagaccgcggtgcaatgggtcctcctggtttgcctggttttcctggtcctcga
ggtcctaagggtcgaccgggtattgatggtatggtcggctatcccggtcttcctggtgat
aagggagaaccgggagaacccggagaagatggttatggtgtcaagggcgcccaaggcgaa
cctggtgacatgggcattactggaccgccgggccgtaaaggctctcgtggtggggttttc
gattgcccttttgttggtccagtctacaaaaaaggtgagcccggataccgtgggcccaag
ggtgatacaggttcagccggacctcatggacaaaccggtcctcagggcacaaagggcatc
cagggattggctggccagcgtggatcccgcggtgatcgtggacctcgaggcccctctggc
ctgccaggtgacatgggtatgcccggctcgaggggacaggacggacgagagggcccacct
ggaccaatgggcgttcctggtcaacctggaatcgccggagatcccggctaccccggaata
gttggagagaagggcgaacgtggtgaaccaggagacccaggtagcagagttggcggttct
cccggtgaaaagggtagaccgggccttccaggctttccaggtgaccgtggtcctccagga
cgcgcaggacccatgggtgttcgaggccggcctggtcctcccggagtcagtgggatacca
ggagctcctggtagaatgggtccacctggcgaaaagggtccacaaggtcttccaagcaca
agattgcctccaggcctccctggtcttccgggtgttcaggggcctcgtggctccgttgga
tcaaaaggtcaacgcggaccctttgggaggtgctatggacgagggcctactggggatatg
ggttctcctggtgatcgcggatattctggaatgcaaggactccgaggtccagaaggtcca
gttggattttcaggcttccagggcctcagtgggagaccgggagaaaaaggcgaacgcggt
gcgaggggaccgacaggtgaacccggtagacctggaccaacgggtccagctggccgacgt
ggatatgctggacgctctggtagatctggcgaaattggactacccggtttttacggacaa
aagggttatatgggcctgccaggtatgtcaggaccaaaaggccgacgtggacgtccagga
atctctcgggatgggcgtccaggtgtgactggacgtcccggtttggaaggtccaaaaggt
gaaaaaggtattcgtggagttgatggcaaagatggcaagcctggcgaaccaggtcgtcct
ggggttggaagccctggacttcctggagcaaagggttacagaggacctgtcggtgatcca
ggtccccctggcatggacccaattcctggacctgtgggagatgtcggcttcatgggcaga
atgggacctaagggaccgcgtggacttcctggacctgtaggcttcacggggcgtgagggt
cttccaggcaaaaagggagatcgcggtgagcccggagacgatggattaccaggcatcgca
ggcgatcgaggtgatgaaggatatccaggcccgccaccaagctttatgaagggtcgtaaa
gggtatggcggtcgtcctggacctaaaggatttacaggacctgcgggtctgcacggcgga
atcggccctagaggaaggcccggaattgcgggaccaagtggacgacctggtttacgcggg
ctggagggttatccaggattgccaggggacactggtacacctggctatcctggacgtcaa
ggcatgaatggatctatgggtcagccaggagacgtaggccctccgggattccaagggctt
gttgggcatcaaggaccgcctgggttaaagggcgccaagggcagacccggtttctgtcca
ataccgcctcctggaccgaaaggagaacctggacctcctggaaggatagggcctgacgga
cctcaaggagacaaaggtattgcgggccttcccggtctcaaaggtactcccggtcagccg
cgaatgggtccagagggtcgtaaaggcgaaagaggctttgatggtcaacctggaaatgcg
gggttacctggagaccagggtgatcgtggcacacctggataccgcgccaaccgcggagaa
cctggggatatgggtccacctggactgcccggagaaaggggccctattggactacctggt
aagaacggtccacccggctatcgtggggctcccggcaaggatggtgtaaaaggcaaacct
ggactgcctggcatttctgggcgtccaggacccgatggacccgttggcgacccgggtgag
cccggacctcgcggtttcgaggggtcaagaggtcctattggacgcccaggttatcccgga
cctaagggaccaaaaggcaagtccggctacggttttgtcggcaggtctggagatttcggc
gaacctggaccccaaggtgaacgcggctactctggattccaaggcacaccgggcagaacg
ggacctccaggcgaaaagggatacaagggctctgctggttacattcccggtcctcggggt
cccacaggagaacgcggtccacccggcgatatgggttatcagggcataaaaggtcagcgc
ggtccacaagggtaccgcggtcccgacggtcctaacggtaccttgggtcttggtgatggc
ggatacctcttcgctgttcattcgcagaaggatactccacccagctgcccggaatttact
cacgaactctacacgggctacagtctggtgacacttcaaggcgacgatgattcaatcagc
atggatctgggcagtccaagctcttgtactcgcgtcttttcaatcatgccattcgcctcg
tgtttcagctctcccccctctggtgcatgtcatttcaacatgcggaatggaaggtccttc
tggctctccacactggagcactatatgacggagcctttgcccgtggaacgcatccagcga
tacatctcccgttgtgtggtgtgcgagtccagaacgaatctcgttgcctttcactctcaa
cgaccttatctggaggagagctgtccacctggatgggaacacgcctggaacgggttcagc
atgcccatggtcgtcagcgcagcggtgtcaggtggagttcaaccacttcactcgccgggc
agttgcctcatgaacttccgtgctctccccttcatcgaatgcaacaatcaccatggcaat
tgtttccactggcaagacggacgttcctattggctgcgagcgatgaccttcaacgagcag
tttacaaagcctgcaggagccacttacaagacggacttgctcagacaagttagtcggtgc
tccgtctgccgaaaatcgatggagatgttggactctttcatgatctcttctcctcgcaca
cctccttacaccctccccgctccctccctctccaccttcaggagaaacctcctctttagt
gcctaa
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integrated database retrieval system
