KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_09355
Entry
EGR_09355         CDS       T05553                                 
Name
(RefSeq) 3'-5' exoribonuclease CSL4
  KO
K07573  exosome complex component CSL4
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EGR_09355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egl03019]
    EGR_09355
Messenger RNA biogenesis [BR:egl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     EGR_09355
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     EGR_09355
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 36345070
NCBI-ProteinID: XP_024346985
UniProt: W6UQT3
LinkDB
Position
Unknown
AA seq 301 aa
MESFVIPGTFLGFKDEKTVEGDFTHVHCGKILATVAGRVNKSLESDSRTRISVLPIRKAC
PTPDVGSIVIAKIANITRRFARCDLVAIDDRPLAGKFRGMIRREDIRATQRDRAEPTLSF
RPGDLVRARVINIVGSSSGAYASTCLPEAEACCAEVGEVIAAARAVAGAVQPSPAHGVTG
SSAATTTYLLSTAEEELGVVLGLGRPPLSGTANVLGATSGCPLLPTSWTEMICPRTLVRF
PRKVARVPDELLKVLLCNSEEMSSSRLSTSSKTFSKSVASLRKSTRQWVRPCITGADCVN
Y
NT seq 906 nt   +upstreamnt  +downstreamnt
atggagtcttttgttattcctggaacatttctcggatttaaggatgagaagacagtagag
ggcgattttacacatgttcactgtgggaaaattctcgccactgttgcaggccgcgttaat
aagtcattagaatcagattctcgaaccaggatatccgttttacccattcggaaagcttgc
ccgactcccgacgttggttcaatcgtcatcgcaaagattgccaacattacgcgtcgtttt
gcccgctgtgacctcgttgcaatagacgaccgacctctagccggcaaatttcgtggcatg
atccgccgtgaggatattcgcgcaacccagcgggatcgtgccgaacctacactctccttc
cgtcccggtgatctggtccgtgcgcgagtcataaacattgtgggctccagttctggtgca
tacgcctccacctgcctccctgaggcggaggcatgctgcgctgaggtaggtgaggtgatt
gcggcggcacgtgccgtcgctggtgctgtccaaccctctccagcgcacggggttactgga
tcaagtgctgctacgaccacttatctcctctctacggcggaggaagagcttggtgtggtg
ctgggcctcggacgccctccgctcagcggaaccgctaatgttctcggtgccacctctgga
tgccctcttttgcctaccagctggacggaaatgatttgtccccgtaccctcgttagattc
ccgcgtaaggtggcgcgggttcctgacgaactgttaaaagtgcttttgtgtaactcggag
gagatgagctcctctagactctcgacatcaagtaaaacattctccaaatctgtggcgtcg
ctgcggaaatctactagacaatgggtgcgtccctgtataactggggcagattgtgttaac
tactga

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