KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_09441
Entry
EGR_09441         CDS       T05553                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03020  RNA polymerase
egl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EGR_09441
  09124 Replication and repair
   03420 Nucleotide excision repair
    EGR_09441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egl03021]
    EGR_09441
   03400 DNA repair and recombination proteins [BR:egl03400]
    EGR_09441
Transcription machinery [BR:egl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EGR_09441
DNA repair and recombination proteins [BR:egl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EGR_09441
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Ogr_Delta DZR Zn_ribbon_10
Other DBs
NCBI-GeneID: 36345156
NCBI-ProteinID: XP_024346877
LinkDB
Position
Unknown
AA seq 143 aa
MCLKLHASSCSRFPNQVFGRMEEDVKTEGVGILFCSECNNMLYPKEDKRHKRLMYACRNC
EFMQPADNPCIYVNRLEQAIDELALIVPDVVHDPTLPRTEEHQCPKCKKQEAVFFQSQTV
RAEENMRLYYVCTNLDCLHKWTE
NT seq 432 nt   +upstreamnt  +downstreamnt
atgtgcttaaagcttcacgcctcttcgtgttcgcgtttccccaatcaggtctttgggcgg
atggaggaggatgtaaaaacagaaggtgttggcatccttttttgcagtgagtgcaacaat
atgctttacccaaaggaagataaacgacacaaaaggctcatgtatgcatgtaggaattgt
gagtttatgcagccggcggataatccctgcatttatgttaatcgtttggagcaggccatc
gatgagttagcgctgatagtccctgacgtggtacacgatccaacactaccgagaacggag
gagcatcagtgtcctaagtgtaagaaacaggaagcggtatttttccaatcccaaacagtc
agggccgaagagaatatgcgtctatactatgtgtgcactaatcttgattgcctccacaag
tggactgaataa

DBGET integrated database retrieval system