Elizabethkingia bruuniana: AYC65_06295
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Entry
AYC65_06295 CDS
T05037
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
egm
Elizabethkingia bruuniana
Pathway
egm03420
Nucleotide excision repair
egm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYC65_06295
03430 Mismatch repair
AYC65_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egm03400
]
AYC65_06295
Enzymes [BR:
egm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYC65_06295
DNA repair and recombination proteins [BR:
egm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYC65_06295
MMR (mismatch excision repair)
Other MMR factors
AYC65_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
DEAD
ATPase
Motif
Other DBs
NCBI-ProteinID:
AQX84634
LinkDB
All DBs
Position
1340618..1342438
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AA seq
606 aa
AA seq
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MFIWEKDSINKEQEDAILEDNSVLLIACPGSGKTRTLTFKIAYELSRLKSDKEFVIAITY
TNRASDEIKERVELLGVDTSQLWIGTIHSFCMEWILKPYHLYSERLKNGFKVINSFDSEK
ILTELCKPYKEEKITYYDCGILAKTDNFYLTCLDTKKHNSLQKILGEYFAILEKNRQIDF
EQILFYAYEILKSKPVVANILSKLFPFILIDEYQDTKEIQYHIISKILSVNKGNSKTLIV
GDPNQSIYDSLGGYPMPKDELEKLLGFELTPLSLDKNYRSSSAIINYFDYYKTFDTPIVA
FGNGKDYPSIITFNSVVSVDDLIEELAQLILYNVETAGISPNEICITAPQWVHIASITRK
LIIRLPDFSFDGPGMAPFSRDIDNFWFKVSRVALTEPSPFMYVRRLRWSKEILNELDSAG
VDVSNVSSKEFLRICNSFEINETDGLTYLKSFFNQICEKLKIVLPNFPLLDEHFNSFFAS
SESRIQRLIDEGNPYIGDIENFRKVFRQRDGITVSTIHGTKGEEYDAVIGFGLLDGYVPH
FNDNNGIENSKKLLYVLASRARKNLHLISEKYRNVHKFYAPDGKPPTSHLLEYTYDYSFQ
KFEGMD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttgggaaaaagacagtatcaataaagaacaggaagatgcaattcttgaagat
aatagcgtacttcttattgcttgtcccggaagcggtaaaacgagaacccttacattcaaa
attgcttatgagttaagcaggttgaaatcagacaaggaattcgttatagccataacctac
actaatagagcttccgatgagataaaggagcgggttgagttattaggtgtcgatacgtca
caattatggattggcactatccattctttttgtatggaatggattttaaagccatatcat
ttgtattctgaacgattgaagaacggctttaaggttatcaattcttttgacagcgaaaag
atattgaccgaattatgcaaaccctataaagaagaaaaaataacctattatgattgtggc
atccttgccaaaactgataatttctatttgacctgtttagacacaaaaaaacataattcg
ttacaaaaaattcttggggaatattttgcaatccttgaaaaaaaccgacagattgatttt
gaacaaattttgttttacgcttatgaaatactcaaatcaaaaccagttgtagcaaatatt
ctatccaaattattcccttttattttaattgatgagtatcaggatactaaggaaatacag
tatcacatcatatccaaaatattaagcgttaacaaaggcaattcaaaaacacttattgtt
ggagacccaaaccaatctatttacgactcgctgggaggttacccaatgcctaaagatgaa
ttagaaaaattattaggatttgaattgaccccattaagcttagataaaaactataggtca
tcgtcggctattatcaactattttgattattataaaactttcgacactccaattgttgca
tttggtaatggaaaagattatccaagtataattacatttaattcagttgtctcagttgat
gatttaattgaagaattagctcagttaattttgtacaatgtagaaacagccggaattagc
ccaaacgaaatatgcatcactgctccacaatgggtacatatcgcaagcattacaagaaaa
cttatcatcagacttcctgatttcagttttgacggaccaggaatggctcctttttctcgg
gatattgataatttttggttcaaggtttcaagagttgcattgacggaaccatctcctttt
atgtatgtaagaaggctaaggtggagtaaagaaatattaaatgaactggatagtgcaggt
gttgatgtttcaaatgtaagtagtaaagaatttttaagaatttgtaattcttttgagata
aacgagacagatggtttaacttatttaaaaagtttctttaatcagatttgtgaaaagtta
aaaattgtactgcccaattttcccttgttagatgaacatttcaattcattttttgcaagt
tctgaaagtagaattcagagattgattgatgaaggaaatccatatattggggatattgaa
aatttcagaaaagtattcagacagcgagatggaattactgtttccacaatacacggaact
aaaggtgaagaatacgatgcagttattggctttggcttattggacggttatgttcctcat
tttaatgataataatggtattgaaaattcaaagaaactcttgtatgtattagcttcgaga
gcaagaaaaaatttacatcttatttctgaaaaatatagaaatgttcataagttttatgcg
ccagatggaaagcccccaacctcacatttgcttgagtatacttatgattattctttccaa
aaatttgaagggatggattga
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