Elizabethkingia bruuniana: AYC65_10170
Help
Entry
AYC65_10170 CDS
T05037
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
egm
Elizabethkingia bruuniana
Pathway
egm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYC65_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egm03019
]
AYC65_10170
Enzymes [BR:
egm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYC65_10170
Messenger RNA biogenesis [BR:
egm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AYC65_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
P-loop_SecA
AAA_22
Cas3-like_C_2
UvrD-helicase
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AQX85351
UniProt:
A0A7T7ZY31
LinkDB
All DBs
Position
complement(2192430..2193710)
Genome browser
AA seq
426 aa
AA seq
DB search
MTFDDLKLIEPISKALQEEGYKTPTSIQEQAIPKILAGKDLLGCAQTGTGKTAAFAIPIL
QLLTERSENKHRKGVIKALILTPTRELAIQIEENFEAYGRHLPLKTMVIFGGVKQGAQEE
KLKRGVDILVATPGRLLDFISQGIITLKNLDIFVLDEADRMLDMGFVHDVKRILKHLPEK
RQNLFLSATMPKEIQKLASEILVNPVKVEVAPVSSTADTIDQSVFFVDKDDKINLLIHLL
QDQSLSPVIVFSRTKHGADKIAKKLNQSKISAEAIHGNKSQNARQNALSNFKSGKTRILV
ATDIAARGIDIDNLKYVVNFELSDVAETYVHRIGRTGRAGASGTSFSFVDGLDLVNLRNT
EKLIGKKIFVNKEHPFHTDDLVEQKRDSNNKPVFGGARPSNAGNNNNSNKRNVKTSKKPF
FRGKKK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttgactttcgacgatttaaaattaatagaacctatttccaaagcattgcaggaagaaggt
tacaagactccgacctctattcaggagcaggcaataccgaaaattcttgccggaaaagat
ctattaggatgtgcacaaaccggtaccggaaaaacggccgcttttgctattcctatctta
cagcttcttacagaaagaagcgaaaataaacaccgtaaaggtgttataaaagcattgata
ttaacgccaacaagagagctggcaatacaaatagaagaaaacttcgaagcttacggaaga
cacttgccattgaaaacaatggtgattttcggtggagtaaagcaaggtgctcaggaagaa
aagctaaaaagaggagtagatatactcgtagcaactccggggcgtttgttagactttata
agccagggaattattacgctgaagaatctggatatttttgttctggatgaagcggacagg
atgctcgatatgggttttgttcatgatgtaaagcgtatcttaaaacatttgccagagaaa
agacaaaatcttttcctttctgcaacaatgcccaaagaaatacaaaaactagcttccgaa
atattggtaaatcctgtaaaagttgaagtagcacctgtttcttctacagcggatactatt
gatcaatctgttttctttgtagataaggatgataaaattaatcttcttattcatctttta
caggatcaaagtttatctcctgttattgtcttctctcgtacgaagcatggagctgataaa
attgcaaaaaaacttaatcagtctaaaatatcagctgaagccattcatgggaacaaatcc
cagaatgcaagacaaaacgctttgagtaatttcaagagcggaaaaaccagaattctggta
gctacagatattgcggcaagaggaattgatattgataacctgaaatatgttgtaaacttc
gaactttcagatgtagcggaaacttatgttcaccgtattggaagaacgggtagagcagga
gcttcaggaacttcattctcatttgttgacggattagatttagtgaatctaagaaataca
gaaaaattaatcggaaagaaaatttttgtaaacaaagaacatccttttcataccgatgat
ttggtagagcaaaaaagagattccaataataaaccggtttttggtggtgcaagaccttca
aatgctggaaataacaataacagcaataaaagaaatgtaaagacttctaaaaagcctttc
tttagagggaaaaagaaatag
DBGET
integrated database retrieval system
