Elizabethkingia bruuniana: AYC65_16195
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Entry
AYC65_16195 CDS
T05037
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
egm
Elizabethkingia bruuniana
Brite
KEGG Orthology (KO) [BR:
egm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egm03032
]
AYC65_16195
03400 DNA repair and recombination proteins [BR:
egm03400
]
AYC65_16195
Enzymes [BR:
egm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AYC65_16195
DNA replication proteins [BR:
egm03032
]
Prokaryotic type
DNA Topoisomerases
AYC65_16195
DNA repair and recombination proteins [BR:
egm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AYC65_16195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AQX86446
UniProt:
A0A7T7ZZ08
LinkDB
All DBs
Position
3481068..3483608
Genome browser
AA seq
846 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGNDFEVTSSMGHIRDLPKKGMGINLETFTPDYEVSPDKK
KLVTELKSLAKKADMVWLASDEDREGEAIAWHLAEELKLKEDKTKRIVFHEITKNAILKA
IENPRKIDNNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IHGFQSQASYKVEGTFLNDEKKEILAKLKKDFSTEQEAESFLNQCSTADFKVLNVEKKPG
QRSASAPFTTSTLQQEASNRLGYSVTSTMRVAQRLYEEGYITYMRTDSVNLSQEAINSAK
ATITKEFGEEYSAPRNYTTKNASAQEAHEAIRPTDFGVKAVGDAQLNKLYQLIYKRAMAS
QMANAKIEKTVIEIGNQKLPQHFEATGEVIIFDGFLKVYGITKNDEEDDENDDKLLPKVN
IGEALKYKKIIATEKYTKAPARFTEASLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IMAKEREIVQLTLTSSLKKETLTEKYGADKNKFLPTDIGVVVNDFLVNNFNEVLDYGFTA
RVEEAFDIIAEGNRAWKDVMTEFYGKFHPRIADVEENADRANGDRVLGVDPKTGKNVHAR
IGRFGAMIQIGETDDEEKPIFASLMPNQNITTITFEEAMELFKIPFNLNDYEGKEVVVGV
GRFGPYIKWGEAYISIPKTEDPLSVDNDRAIEIIEEKKRADAPIATYKGEPVTKGTGRFG
PFIKYKDIFVNVPKKYDFNNLSQSDINELIDAKLEKEANRYIQQWEDQKVSLENGRWGPF
IRFGKKMLKIPLKGKGEKYTAEDLQDISFDEVKKWIIAQDETAFKEKPKAKKAPAKKAAA
KKPSKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatctcgtaattgtggagtcccctgcgaaggctaagacgatacagaagtat
cttggtaatgactttgaagtaacctctagtatgggacacatccgtgatcttcctaaaaaa
ggcatgggtattaaccttgaaacatttactcctgattacgaagtttctccggataagaag
aagctcgttacagagcttaagtctttagcaaaaaaagccgatatggtatggctggcttcc
gatgaagaccgcgagggggaagctattgcatggcatctggcggaggaattaaaattaaaa
gaagataaaactaaaagaattgtatttcatgagattactaagaatgcaattcttaaagct
atagagaatccgagaaaaatagacaataatcttgtcaatgctcaacaggcaagaagagta
ctggatagaattgtaggttttgaaatgtctcctgttttatggaaaaaagtaaaaccaggc
ctttctgcaggacgtgtacagtcggtagccgtacgtcttgttgttgaaagggaaaaagaa
atccacggattccagtctcaggcttcttataaagtagaaggaacttttcttaatgatgag
aagaaagaaattttagcaaaactaaaaaaggacttctctacagaacaagaagctgagtct
ttccttaaccaatgcagtactgcggacttcaaagttttaaatgtagaaaaaaaaccgggg
caacgttctgcttcagctccgtttaccacttctactctacagcaggaagcttcaaacaga
ttaggatattccgtaacttctacgatgcgcgttgcgcaacgtctgtacgaagaaggttac
attacctatatgagaacggacagcgttaacctttctcaggaggctattaattcggcaaaa
gcaactattacaaaagaattcggtgaggaatattctgcaccgagaaactatactactaag
aacgcatctgcccaggaagcacacgaagcaattcgtcctaccgattttggtgtaaaagca
gtaggagatgcacagcttaacaaattataccaactgatatataaaagagcaatggcaagt
cagatggccaatgctaaaattgagaaaacagtaattgaaataggaaaccagaaacttccg
caacattttgaagcaactggtgaagtgattattttcgatggtttcttaaaagtatatggt
attactaaaaatgatgaggaagatgatgagaacgacgataaacttctgccaaaagtgaat
attggtgaggctcttaaatacaaaaaaatcattgctaccgagaaatacacaaaagctcct
gcaagatttacagaagcatcgctggtaagaaaactggaagaactgggaatcggaagacct
tctacttatgctccaactatccagacgattcagaatcgtgaatatgtggacaagagagaa
attatggctaaggaacgtgaaatcgttcagcttactttaacttcttctctgaaaaaagaa
acacttacagaaaagtatggtgctgataagaacaaatttttaccaactgatataggcgtt
gttgttaatgacttccttgttaataacttcaacgaagttcttgattacggatttacagct
cgcgttgaggaagctttcgatattattgcggaaggaaacagagcatggaaagatgtaatg
actgaattctatggaaaattccacccaagaattgctgatgtagaagaaaatgctgacaga
gcaaacggtgaccgtgtgctgggagtagatcctaaaacgggcaaaaatgtacatgcaaga
atcggaagatttggtgctatgatccaaatcggagagacagatgatgaagagaaaccaatc
tttgcttctctgatgccgaatcagaatatcactacaattacttttgaggaagcaatggag
cttttcaaaataccttttaatcttaacgactacgaaggtaaagaagttgtggtgggtgtt
ggacgttttggaccttatatcaaatggggagaagcttatatcagcattcctaaaaccgaa
gaccccctgtctgtagataatgacagagctatcgagattatagaggaaaagaagagagct
gatgctcctatcgcaacttacaaaggagaaccagtaacaaaaggaaccggaagattcgga
cctttcataaaatataaggacatctttgtaaatgttccgaagaaatatgattttaataat
ctttctcaaagtgacatcaacgaactaattgatgccaaactggaaaaagaagcgaacaga
tatattcagcaatgggaggaccagaaggtttctcttgaaaacggaagatggggacctttc
attcgttttggaaagaaaatgctaaaaatcccattgaaaggaaaaggagaaaaatatact
gctgaagatttgcaggatatttccttcgatgaagtaaagaaatggatcattgctcaggat
gaaactgcttttaaagaaaaaccaaaagcaaaaaaagcacctgccaagaaagctgctgct
aaaaaaccttctaaaaaataa
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