Aurantiacibacter gangjinensis: BMF35_a0486
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Entry
BMF35_a0486 CDS
T04581
Name
(GenBank) Ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
egn
Aurantiacibacter gangjinensis
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egn03016
]
BMF35_a0486
Enzymes [BR:
egn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BMF35_a0486
Transfer RNA biogenesis [BR:
egn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BMF35_a0486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
APE27315
UniProt:
A0A0G9ML55
LinkDB
All DBs
Position
I:495158..495778
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AA seq
206 aa
AA seq
DB search
MTVHYHEEDLPAGVLADGDVAVDTETMGLVTHRDRLCVVQISDGNGDEHLVRFAKGSSYD
APNLKAVLADPNRVKIYHFARFDLAAIEYYLGVTAAPVFCTKIASKMTRTYTDRHGLKNL
IDEMLGETISKQQQSSDWGGDELSEAQREYAASDVRYLHRLRDLLIPRLEREGRLDMAQA
CFDFLPTRARLDMAGWADKDIFSHES
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccactatcatgaagaagacctgcccgcaggcgtgctggccgatggcgacgtc
gccgtcgataccgaaaccatgggcctcgtgacacatcgcgacaggctctgcgttgtgcag
atcagcgacggcaatggggacgagcacctcgtgcgcttcgccaagggcagcagctacgat
gcgcccaatctgaaggccgttctggcagacccgaaccgcgtgaagatctatcacttcgcc
cgcttcgacctggcggccatcgaatattatcttggcgtcaccgccgcgccggtgttctgc
accaagatcgccagcaagatgacgcgcacctataccgatcgccacggcctcaaaaacctg
atcgacgagatgctgggcgagacgatttccaagcagcagcaatcgagcgattggggcggc
gacgaattgagcgaagcgcaacgcgaatatgcagcttccgatgtgcgctacctccatcgc
ctgcgcgacttgctgatcccgcggcttgagcgtgaggggcggctggacatggcgcaggcg
tgtttcgatttcctccccacccgcgcccgcctcgacatggcgggctgggcagacaaggac
atatttagccacgaatcctag
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