Aurantiacibacter gangjinensis: BMF35_a1454
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Entry
BMF35_a1454 CDS
T04581
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
egn
Aurantiacibacter gangjinensis
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egn03032
]
BMF35_a1454
03400 DNA repair and recombination proteins [BR:
egn03400
]
BMF35_a1454
Enzymes [BR:
egn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BMF35_a1454
DNA replication proteins [BR:
egn03032
]
Prokaryotic type
DNA Topoisomerases
BMF35_a1454
DNA repair and recombination proteins [BR:
egn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMF35_a1454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
APE28283
UniProt:
A0A0G9MPH1
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All DBs
Position
I:1498020..1499033
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AA seq
337 aa
AA seq
DB search
MASRPSQLIYVDDDLPGITRKRAGKGWAYYDAQGALITDRAEKKRLNAIALPPAYTDAWF
CPAHNGHILATGYDAAGRKQYRYHPEFRAWRESEKFDGCVAFGKMLPLVRKRYQQDMRSP
KLGRDRAVAAVVKLLDLGAVRVGNTQYAKKNRSYGATTLQHRHAEVTGKTLRLRYTAKGG
KKRDVKLSDSSLARVVRRMQDLNGQELFAWAGDDGEPCDVNSGHVNEYLREVMGENFSAK
NFRTWHASVMAFRLLGEATEKLSIKAVLSQVAEHLGNTMAVTRKSYVHPAVIDLIGRQEE
WRATLRLPRATAYANQWERGLLEHLETAPAAQELLAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgtccctcccagctgatttatgtcgatgatgacctgcccggcatcactcgc
aagcgtgcaggcaagggctgggcttattacgatgcgcaaggcgcgctcatcaccgacagg
gcggagaagaagcggctcaacgcgattgccttgccgcccgcctataccgatgcgtggttc
tgccctgcgcataacggccatatcctcgccaccggctatgacgcggcgggccgcaagcaa
tatcgctaccatcccgaatttcgcgcctggcgcgagagcgagaagttcgatggctgcgtg
gccttcggcaagatgctgccgctggtgcgtaagcgttaccagcaggacatgcgatcgccc
aagctgggccgcgatcgcgcggtggcggcggtcgtcaagctgctggaccttggcgcggtg
cgcgtgggtaatacgcaatatgcgaagaagaaccgcagctatggcgccaccacgctgcag
catcgccatgccgaggtgacgggcaagacgctgcgcctgcgctacaccgcgaagggcggc
aagaagcgcgacgtgaaactctccgacagctcgctggcgcgcgtggtgcgccggatgcag
gatctcaacggacaggaactgttcgcctgggcgggtgacgacggcgagccatgcgatgtc
aactccggccatgtgaacgaatatctgcgcgaagtaatgggcgagaatttcagcgccaag
aatttccgcacctggcatgccagtgtcatggcctttcgcctgctgggcgaggcgaccgaa
aagctctccatcaaggcggtgctcagccaggtggcggagcatctgggcaacaccatggcg
gtaacgcgcaaaagctatgtccacccggcggtgatcgacctgatcggccggcaggaagaa
tggcgcgcaaccctgcgcctgccgcgcgccacggcctatgccaatcagtgggagcgcggg
ctgctggaacatctggaaacggccccggctgcgcaggaattgctggccgcgtaa
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