Aurantiacibacter gangjinensis: BMF35_a1992
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Entry
BMF35_a1992 CDS
T04581
Name
(GenBank) Metallo-beta-lactamase family protein, RNA-specific
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
egn
Aurantiacibacter gangjinensis
Pathway
egn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMF35_a1992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egn03019
]
BMF35_a1992
Messenger RNA biogenesis [BR:
egn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMF35_a1992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
DUF6833
Motif
Other DBs
NCBI-ProteinID:
APE28821
UniProt:
A0A0G9MQV2
LinkDB
All DBs
Position
I:complement(2042442..2044091)
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AA seq
549 aa
AA seq
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MKKDYTPEDELLFLALGGSGEIGMNVNLYGCQGKWLMVDLGMSFGASEYPGTELMFADPE
FVEERSDDLLGIVLTHAHEDHIGAIPYFAADLGVPLYATPFTADLIRRKLDEAGLTDEIE
LNVIEEDHGEFSLGPFTVTYIPLAHSIAEGNALLIDTPHGRIFHTGDWKLDEEPQIGTPA
TDEELAEIGDEGVLALVCDSTNVFNPVPSGSEGAVFRGLLEEVQKHHGRRVLVTTFASNV
ARLQTLGEVAKRTGRQLCVAGRSLDRIIEVAQSNGYLDDLPRTVDFDTAMSLPRGEIMIV
ATGGQGEPRAALSRIAEDNHPLSLDKGDVILFSSRQIPGNEIAIGRVQNRLAERGIVMVT
DRQSEIHVSGHPGKPELEALYGWVRPDILIPVHGEMRHMMEQARLGQANGIAHNIVQKNG
DIIRLAPGHPEKLAEIYTGRLVLDGDIIVPANGEAVTMRRRLAHNGILIVVVGDSGAVQI
EGIGLPLDEDYPAFVAEAESDVRDALGKLKGGRARDVEAVKEAARLAARRAVQRWSGKKP
QTRVILARG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagactacacgcccgaagacgaattgctgttcctcgctctgggcgggtccggc
gagatcggcatgaatgtcaatctgtatggctgccagggcaagtggctgatggtggacctc
ggcatgagtttcggcgccagcgaatatcccggcaccgagctgatgttcgccgatcccgaa
ttcgtcgaggagcgctccgatgacctgctgggcatcgtcctcacccatgcccatgaggac
catatcggcgcgatcccttatttcgctgccgaccttggcgtgccgctctatgcgacacca
ttcacggcagacctgatccggcggaaactggacgaggccggtctgaccgacgagatcgaa
ctcaatgtgatcgaggaggaccatggcgagttctcgctcggccccttcaccgtcacctac
atcccgctggcccactcgattgcagagggcaatgccctgctgatcgacacgccgcatggg
cgcatcttccacaccggcgattggaagctggatgaggagccgcagatcggcacgccggca
accgacgaagaacttgccgagatcggcgatgagggcgtgctggcgctggtgtgcgattcc
accaatgtgttcaatccggtgccctccggcagcgaaggtgcggtgttccgcggcctgctg
gaagaggtgcaaaagcatcacgggcggcgcgtgctggtgaccaccttcgcatcgaatgtc
gcgcgcctgcagactttgggcgaggtggcgaaacgcaccggacgccaactctgcgtggct
ggtcgttcgctcgaccggatcatcgaagtcgcgcaatcgaacggttatctggatgacctg
ccgcgaaccgtcgatttcgacacggcgatgagcctgccgcgcggcgagatcatgatcgtc
gcaacaggcgggcagggtgagccgcgtgccgcgctcagccgcatcgccgaagacaatcac
ccgctcagcctcgacaagggcgatgtcatcctgttctccagccgccagatcccgggcaac
gagatcgccatcggccgcgtccaaaatcgccttgccgaacgcggcatcgtgatggtgacc
gacaggcagagcgagattcacgtatccggccatcccggcaagccggagcttgaggcgctg
tatggttgggtacgcccggacatcctgattcccgtccacggcgagatgcggcacatgatg
gagcaggcgcgtctcggccaggctaacggcattgcacacaacatcgtgcagaagaatggc
gacattatccggctcgcacccggccatccggaaaagctcgccgagatatatacaggtagg
ctcgtgctcgatggcgacatcatcgtgcctgccaatggcgaagctgtcaccatgcgtcgt
cggcttgcgcataatggcattttgattgtcgtcgtaggcgacagcggtgccgtgcagatt
gaaggtatcggtctgcctctagacgaggattacccagccttcgtggcagaagcggagagc
gatgtgcgcgatgcgctgggcaagctgaaaggcgggcgcgcccgcgatgttgaagcggtg
aaggaagccgcgcggctcgcggctcggcgtgccgttcagcgctggtccggcaagaagccg
cagacgcgcgtcatactggcgcgcgggtag
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