Aurantiacibacter gangjinensis: BMF35_a2030
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Entry
BMF35_a2030 CDS
T04581
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
egn
Aurantiacibacter gangjinensis
Pathway
egn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMF35_a2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egn03019
]
BMF35_a2030
03009 Ribosome biogenesis [BR:
egn03009
]
BMF35_a2030
Enzymes [BR:
egn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BMF35_a2030
Messenger RNA biogenesis [BR:
egn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMF35_a2030
Ribosome biogenesis [BR:
egn03009
]
Prokaryotic type
rRNA processing factors
BMF35_a2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
APE28859
LinkDB
All DBs
Position
I:2078192..2080840
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AA seq
882 aa
AA seq
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MLIDARHSEETRVAVLKGNRIEEFDFESAEHKQIKGNIYLAKVTRVEPSLQAAFVDFGGN
RHGFLAFSEIHPDYYQIPASDREALLAEEQAAAEEEAALREEEDEDEDSEVTDDGDEDED
EDEDEAGVEEIDTSEKDDVSVIEEGHVDGSSEDPDDSDGDETAEDDADEKPARRGRGRGR
NRRQGKGNGGQRRRGSRAKEIDEARAKRQALRRRYKIQDVIQRRQVLLVQVAKEERGNKG
AALTTYLSLAGRYCVLMPNSSHGGGISRKISNGSDRKRLKTIVSDLSLPKSMGLIVRTAG
LSRTKTEIKRDFDYLARLWDEIRERTLGSSAPSMIHSDSDLIKRAIRDIYNREIEEVMVE
GEEGYKAAKQFMKLLMPSHARRVKHYNDPVPLFQRYGAEDQLSAMYDPMVQLKSGGYLII
NPTEALVSIDINSGRSTKEHGIEQTALHTNLEAAKEIARQLRLRDMAGLVVIDFIDMEHN
SNVRKVERCMKESLKNDRARIQVGRISGFGLMEMSRQRLRTGVLEASTRECPHCDGTGLV
RTASSSGLAALRLIEDEAAKGKGSVITLYASTEAAVYLLNTKRADLTEIEERYHVTVEVQ
PEGEDEGAKMRVTSSGPKPTEAPKFDTIVDDDDDEDEDIVDEDEGEEDDGPPRKRRRRRR
GGRGRNKARQQDEDSSDDDSDSDAGDSGDASEETSDDSDDDDKPKRRRGRRGGRGRGRKK
QAEDNGENENDAVEAPAEAEAEAEAPAEEEKPKPKRRTRKKKADAEAPADEAAVEAEAPA
EEEKPKPKRRTRKKKVEDDAPAEAEAEAKAETEDKPKPKRTRRKKADAASEDAPGDSPAL
AKVITEGEAESTSGEAQAGDADGGTNADGSPRRGWWQRTFGN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgatgcgcgccactcggaagaaacccgggtggcggtactcaagggaaaccgc
attgaggaattcgactttgaatctgccgaacacaagcagatcaagggcaacatatatctc
gccaaggtaacgagggtcgagccctcgctgcaggcggctttcgtcgatttcggtggcaat
cgccacggcttcctcgccttcagcgaaatccatcccgactattaccagatccccgcatcc
gaccgcgaggcgctgctggccgaagaacaggctgcggcagaggaagaggcggccctccgc
gaggaggaggacgaagacgaggacagcgaagtcaccgacgacggtgacgaggatgaagac
gaggacgaggacgaagccggcgtcgaggaaatcgacaccagcgagaaggacgatgtttcc
gtcatcgaggaaggccatgtcgacggctcttccgaagatcccgacgatagcgatggcgat
gagactgccgaagacgatgcggatgaaaagcccgcccgtcgcggtcgtggccgtggtcgc
aaccgtcgccagggcaagggcaatggcggccagcgccgccgtggcagccgcgccaaggaa
atcgacgaagcgcgcgccaagcgccaggcgctgcgtcgccgctacaagatccaggacgtt
atccagcgccgccaggtgctgctcgtgcaggttgccaaggaagagcgcggcaataagggc
gccgcgctgaccacctatctcagccttgcgggccgctactgtgtgctgatgcccaattcc
agccatggcggcggcatttcgcgcaagatcagcaacggttcggaccgcaagcgcctgaaa
acgatcgtcagcgacctgtccctgcccaagagcatggggcttatcgtccgcactgccggc
ctttcgcgcacgaagaccgagatcaagcgcgatttcgattacctcgcccgcctgtgggac
gagattcgcgaacgcacgctgggctccagcgcgccgagcatgatccattcggactccgac
ctcatcaagcgcgccatccgcgacatctataatcgcgaaatcgaagaggtgatggtcgag
ggcgaggaaggctacaaagccgccaagcagttcatgaagctgctgatgcccagccacgcc
cgccgggtgaagcattacaacgaccccgtgccgctgttccagcgctatggggccgaagac
cagctctcggcgatgtacgatccgatggtgcagctgaaatcgggcggatacctgatcatt
aacccgaccgaagcgcttgtctccatcgacatcaactcgggccgctccaccaaggagcac
gggatcgagcagaccgcgctgcacaccaatctggaagcggcgaaggaaattgcccgccag
ctgcgcctgcgcgacatggccggccttgtggtcatcgacttcatcgacatggagcacaat
tccaacgtgcgtaaggtcgagcggtgcatgaaggaatcgctcaagaacgaccgcgcgcgc
atccaggtgggccgcatctccggcttcggtctgatggaaatgagccgccagcgcctgcgg
accggcgtgctggaagcctccacgcgcgaatgcccgcattgcgacggcacgggccttgtc
cgcacggccagctcgagcggccttgccgcgctgcgtctgatcgaggacgaggccgccaag
ggcaagggttcggtcatcacgctttatgcttcgaccgaagcggcggtgtacctgctgaat
acgaagcgcgccgatctcaccgagatcgaggagcgctatcacgtcaccgtggaagtgcag
ccagagggcgaggatgaaggcgcgaagatgcgcgtcacctcttccggtccgaaaccgacc
gaagcgccgaaattcgacaccatcgtcgatgatgacgatgatgaggacgaagacatcgtc
gacgaggacgagggtgaagaggatgatggtccgccgcggaagcgtcgccgtcgccgccgt
ggcggtcgcggtcgcaacaaggcccgccagcaggacgaggattcgtccgacgacgacagc
gattccgatgccggtgacagcggggatgcgagcgaggaaacctccgacgacagcgacgac
gacgacaagcccaagcgccgtcgtggacgccgcggcggccgtggtcgcggccggaagaag
caggccgaggacaatggcgagaatgaaaacgacgccgtagaagcgcccgccgaagccgaa
gccgaagccgaagctcctgccgaggaagagaagcccaagcccaagcgtcgcacccgcaag
aagaaggccgacgccgaagcgcctgctgatgaagcggccgtcgaagctgaagcaccggcc
gaagaggaaaagcccaagccgaagcgccgtacgcgcaagaagaaggtcgaggatgacgct
ccggcagaagcggaggcggaagccaaggccgaaaccgaagataagcccaagcccaagcgc
acccgtcgcaaaaaggccgatgctgccagcgaagacgcgccgggcgacagccctgccctc
gcgaaggtcatcaccgaaggcgaagcggaatccaccagcggcgaggcacaggctggcgac
gcggatggcggaaccaatgccgacggttctccgcgccgcggatggtggcaacgcaccttc
ggtaactga
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