Aurantiacibacter gangjinensis: BMF35_a2086
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Entry
BMF35_a2086 CDS
T04581
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
egn
Aurantiacibacter gangjinensis
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egn03400
]
BMF35_a2086
Enzymes [BR:
egn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMF35_a2086
DNA repair and recombination proteins [BR:
egn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BMF35_a2086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APE28915
LinkDB
All DBs
Position
I:complement(2145868..2149311)
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AA seq
1147 aa
AA seq
DB search
MSGKVFPLEDNQAAAVDPRDSVWLSASAGTGKTQVLSARVLRLLLEPGVRPEQVLCLTFT
KAGAAEMATRVNEVLANWVRMDSELLAADLRAIGADFDPDTIARARTLFASVLDCPGGGL
RIDTIHAFSQWLLAAFPQEAGLTPGTRPMEDRDRDLLAERVLRELLVEWEDTSPQARAAL
EALSLRMGPDGARSWMMRCAAMRDAWFGPGAWQPPMEPRVKRLIGLDADASRESLSATCI
TPRFDVQDLQQVLAAYAGWGTKSGLGIAEPIEAWLAGNAAARLAGCADLLGAIFNKEGVP
KYAKSVEKVDPDALAAADRLREQLLSIAEQATLLDLVDIITPALEVGRLFALRWEDAKAR
EGLVDFDDLIAKAAQLVKCEDMSAWIRYKLDRRFDHILVDEAQDTNAAQWAIVDALTDDF
FSGEGQAGERVRTIFVVGDYKQAIFRFQGTSPENFAAARASYAKRLSDWVESAVQMRGRV
IARELQDLGLGRSYRTADNVLRFVDEAIQAIGHENFGLRDAPEPHEGQDRAGLVTLWQPV
PGHPDEVEIEGGDGPEIGVSEPERRMAEKIALQIRRMWDGGFTLVKGDTPRNATPGDFMV
LVRKRKELAGLIVAKLHAAGVPVAGVDRLRLGAPLAVKDLMAALRFAVQPRDDLSLACLL
VSPIFGWGQDDLLRYAARPEKRALWDHLRDLDDAKPREAVEALGRLLERADYEPPQALMH
WMLTGPWQARGRLVARLGREANDPIDELLNAAQQFTASNTPSLQGFIRWFDAGDGELKRE
AEGAGDMVRVMTVHGSKGLQAPIVILADATGDPDASRASGLELDEELPGNDTARTIPLPG
LRSEERVGRIADAAEAMKAAERQEHWRLLYVAMTRAEEALFIGGALGKREKEPAPDSWYA
RLAPLFDAAPLEDDIWGWRLEEVRRAPSVPHRTQQALDIHEPLPAWAMRPVGEEPRPPRP
LAPSASADEAGADPPLPPEQAAIAARRGVLIHALLERLPDVPVDMRESAGRAWLERHGPA
LSSEERAEMLDRALAVMDAGEWRELFGPSALAEVPLAATVGEQVIAGTADRLLVTPERVL
VADFKTARRPPASLEQVPQSTLRQMAAYVAALQVIYPDRAVEAAVLYTQTPQLIAIPADI
LAAHKPG
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcaaggtctttccgctggaggacaatcaggccgccgctgtcgatccgcgcgac
agcgtgtggctgtcggcctcggccgggacgggcaagacccaggtgctttccgcgcgcgtg
ctgcgcctgctgctggagccgggcgtgcggcctgagcaagtcctctgcctgaccttcacg
aaggctggcgctgccgagatggcaactcgcgttaacgaggtgctggccaactgggtgcgg
atggattccgaactcctggcggcggacttgcgcgccatcggcgccgattttgatcccgat
acgattgcgcgcgcgcgaacgctgttcgcctcggtgctcgattgcccgggtggtgggttg
cggatcgacacgatccacgccttttcgcaatggttgctggcggcgtttccgcaggaagcc
gggctgacgccgggtacgcgcccgatggaggatcgcgaccgcgacctactggcagagcgc
gtgttgcgcgagttgctcgttgagtgggaagacaccagccctcaagcacgcgcggcgctt
gaggcgctttcgttgcggatgggcccggatggcgcgcgaagctggatgatgcgctgcgcg
gccatgcgcgatgcgtggttcggacccggcgcttggcagccgccaatggaaccgcgcgta
aagcgcctgatcgggctcgacgccgacgcaagccgtgaaagcctctccgcgacatgcatc
acgccgcgattcgatgtgcaagatttgcagcaagtcctggccgcctatgcgggctggggg
acgaaatccggcctgggcatcgcggaaccgatcgaagcatggctggccggcaatgcggcg
gcgcgattggccggatgtgccgatctgttgggcgcgatcttcaataaggaaggtgtgccc
aaatacgccaaatcggtcgagaaggtcgatccggacgcgctggccgctgcggaccggctg
cgcgagcaattgctgtccatcgccgagcaggcgaccctgctggatcttgtcgacatcatt
acacccgcgctcgaagtcgggcggttgttcgcccttcgctgggaggacgcgaaagcacgc
gaggggctggtcgatttcgacgatctgatcgccaaggccgcgcagctggtgaagtgcgag
gatatgtccgcctggatccgctacaagctggaccggcgcttcgaccacatcctcgtcgac
gaggcgcaggataccaatgccgcgcaatgggctatcgtcgatgcgctgacggacgacttc
ttcagcggggaagggcaggcgggcgagcgggtgcgcacgatcttcgttgtgggggattac
aagcaggcgattttccgctttcagggcaccagcccggagaatttcgctgccgcgcgcgca
tcctacgcgaagcgattgtccgactgggtcgaaagcgccgtacagatgcggggtcgcgtc
attgcgcgcgaattgcaggatttggggcttggccggtcctaccgcaccgccgacaacgtg
ctacgcttcgtggacgaggccatccaagccatcggccatgagaatttcggcctgcgcgat
gcgccggaaccgcatgaggggcaggaccgcgcgggccttgtcacgctatggcagcccgtc
cccgggcatccggacgaagtcgagatcgaaggtggcgacggtccggagatcggcgtgtcc
gagccggagcgccgcatggcggagaagattgcattgcagatccgccgcatgtgggatggc
ggcttcacgctggtgaaaggcgatacgccgcgcaacgcgacgccgggcgatttcatggtg
ctggtgcgcaagcgcaaggagctggcgggcctcatcgttgcaaagctgcacgcggcaggc
gtgccggtggcaggtgtagaccgcctgcggctcggcgcgccactggcggtgaaagacctg
atggccgcattgcgtttcgccgtgcagccgcgcgatgacctcagccttgcatgcctgctc
gtttcaccgatcttcggttggggccaggacgacttgcttcgctatgcggctcgcccggaa
aagcgcgctttatgggatcacctgcgcgatctggacgatgccaaaccgcgcgaagctgtc
gaagcgctcggtcgcctgcttgaacgcgccgattacgaaccgccgcaggcgctgatgcac
tggatgctgaccgggccatggcaagcgcgcgggcggctcgtggcgcgtctcgggcgagag
gcgaacgatccgattgacgagctgctcaacgccgcacagcaattcaccgcctccaacacg
ccgagcttgcagggtttcatccgctggttcgatgccggcgatggcgagctgaagcgcgaa
gccgagggcgcgggcgacatggtacgggttatgaccgtgcatggctccaaaggcttgcaa
gcgcccatcgtcattctcgccgatgcgaccggcgatcccgatgcctcgcgcgcatccggc
ctggaactggacgaggaactgccgggcaacgacacggcgcgcaccatcccgctgccgggg
cttcggtccgaagagcgggttgggcgtattgcggatgccgcagaagccatgaaagccgcc
gagcgccaggagcattggcgcctgctttacgtcgccatgactcgcgccgaggaagcgctg
tttatcggcggtgcgctaggcaagcgcgagaaagagcccgcacccgatagctggtacgcg
cggctcgcgccgctcttcgatgccgcgccgcttgaggacgacatctggggctggcgtctg
gaggaggtcaggcgtgcgccgtccgttccgcacaggacgcagcaggctctcgatatacat
gagccgctaccggcttgggccatgcggccggttggcgaggaaccgcgcccgccgcgtccg
ctcgcgccgtccgccagcgcggatgaggcgggtgccgatccgcctttaccgccggagcag
gctgccatcgccgcacggcgcggagtcctgatccacgctcttctggagcgcttgccggat
gtgcccgtcgatatgcgcgaaagtgcggggcgggcatggctggaacgacatggcccagcc
ctctcgtcggaagaacgcgcggagatgctggaccgtgcgctcgccgtgatggatgctggc
gaatggcgcgagctcttcggcccgtccgcgctcgcggaagtgccgctcgccgccacggtg
ggcgaacaagtgatcgctggcacggcagacaggctgctcgtcacgccggagcgcgtgctg
gtcgccgatttcaagactgcgcgccgcccgccggcgtcgctggagcaggttccgcaaagc
acgctgcgacagatggcggcctatgtcgcggccttgcaggttatctaccccgaccgcgcg
gtggaggcggccgtgctctacacgcaaacgccgcagctcatcgctatccccgccgacatc
ctcgccgcgcacaagccgggctag
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