Aurantiacibacter gangjinensis: BMF35_a2125
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Entry
BMF35_a2125 CDS
T04581
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
egn
Aurantiacibacter gangjinensis
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egn03032
]
BMF35_a2125
03400 DNA repair and recombination proteins [BR:
egn03400
]
BMF35_a2125
Enzymes [BR:
egn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BMF35_a2125
DNA replication proteins [BR:
egn03032
]
Prokaryotic type
DNA Topoisomerases
BMF35_a2125
DNA repair and recombination proteins [BR:
egn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMF35_a2125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
DUF6264
Motif
Other DBs
NCBI-ProteinID:
APE28954
UniProt:
A0A0G9MR41
LinkDB
All DBs
Position
I:complement(2186674..2189226)
Genome browser
AA seq
850 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGGDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWEVYSDQRN
RSQVKAIADAAKGADRLILATDPDREGEAISWHVMDLLKKRKALPSEVSRVTFNAITKKA
VTDAMKAPRELDQDLIDAYLGRRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLICE
REREIEAFRADEYWSVTAKMAQDGTDFDARLVRFDGKKLERLSIGDKGTADAAKAAVEQG
QFTVEDVETKPVKRNPAPPFTTSTLQQEAARKLGFSASHTMRCAQSLYEAGAITYMRTDG
VQMDMSAIMAARDAIEERFSAEYRPEKPRFYQTKAKNTQEAHEAIRPTNFSRDRAGSGDE
AKLYDLIFKRAMASQMSTAQLERTTITMRDPTGKHELRATGQVVQFPGFLAVYSESFDEK
TEDDDDNLLPVMRKGDSPAKKAVEATQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTI
QTLRDRDYVRMEKNRFFAEDSGRLLTAFLERFFPRYVAYDFTAEMEDELDEVSGGRAEYK
ALLSDFWRDFKPKSDEVMERQPSEVTEVLDEFLADYLFPEREDGHPPRWCPLCAEQGREG
GELHLRGGRYGAFIGCDNYPECTFRRKFGQPGADDGSDDGVMGEHPETGEPIERKSGRFG
PYVQMGEGKEAKRASIPKDLDDFDLDWAVKLLDLPRIIGGHPETGKEIEASIGRYGPYLR
HDGKYAKLSSTRDVFETGMNAAVTLLAEAASKGGRGRGSREPLKVLGKTEAGDEVKLMDG
RYGPYVTDGNVNATIPKDKDKDRLTLDEALAMIAEKAAKAPAKKKRKAPARKKAPAKKKP
AAKKKAAVKS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgtcatcgtagaatcgcccgcaaaggcgaagaccatcgagaaatatctgggc
ggagacttcaaggtcctcgcatcctacggccatgtgcgagacctgccgcccaaggatggt
agtgtgcggcctgacgaggattttgcgatggattgggaagtctattccgaccagcgcaat
cgcagccaggttaaggctatcgccgatgccgccaagggcgcagaccgcctgatcctcgcc
accgaccccgaccgggaaggagaggcgatcagctggcatgtgatggacctgctgaagaag
cgcaaggcgctgcccagcgaggtcagtcgcgtcactttcaacgccatcaccaaaaaggcc
gtgaccgatgcgatgaaagctccgcgcgagctcgaccaagacttgatcgacgcctatctt
ggtcggcgcgcgctcgattacctgttcggcttcaccctgtcgccggtgctgtggcgcaag
ctgcccggcgcaaagtcggcaggccgcgtgcagtcggtcgcgctgcgcctcatctgcgag
cgggaacgcgagatcgaggcgttcagggcggacgaatactggtccgtcaccgcgaaaatg
gcgcaggacggaaccgatttcgacgcgcgcctagtgcgcttcgatggcaagaagctggaa
cggctatccatcggcgacaagggcaccgccgacgctgcaaaggccgctgtcgagcagggc
cagttcacggtcgaagatgtcgagaccaagccggtcaagcgcaaccccgcaccgcccttc
acgacatcgacattgcagcaggaagccgcgcgcaagctgggcttttccgcgagccatacc
atgcgctgcgcccagtctctttatgaggcaggcgcgatcacatacatgcgtaccgatggc
gtgcagatggatatgtctgcgatcatggccgcgcgcgacgctatcgaggagcggttctcg
gccgagtatcgcccggaaaagccccgtttctaccagacgaaggccaagaacacgcaggaa
gcgcacgaggccattcgcccgaccaatttcagccgcgaccgcgccggatcgggtgacgaa
gccaagctttacgaccttatcttcaagcgcgccatggcgagccagatgtcgacggcgcag
cttgagcggacgaccatcaccatgcgcgatccgaccggcaaacacgagctgcgcgcgacc
ggccaggtggtgcaattccccggcttcctcgccgtctattccgaaagcttcgacgagaag
actgaggatgacgacgacaatctgctgcccgtaatgcgcaagggcgatagcccggccaag
aaagcggtcgaggcgacccagcattttacccagccgccgccgcgtttctcggaggcaagt
ctggtgaagcggttggaggaattagggatcggccgcccgtctacctatgcctccaccatc
cagacactgcgcgaccgcgactatgtccgcatggagaaaaaccgtttcttcgcagaggat
tcgggaagacttctcacagcttttctcgaacgctttttcccgcgctatgtcgcttatgat
ttcaccgccgagatggaagacgagctggacgaagtctccggcgggcgggcggaatacaag
gcgctgctgagcgacttctggcgtgatttcaaacccaagagcgacgaggtgatggagcgc
cagccttcggaagtaaccgaagtgctggacgaattcctcgccgattaccttttccccgag
cgcgaggacggacacccgccgcgctggtgcccgctctgtgccgagcagggacgggaaggg
ggcgaactgcacctgcgcgggggccgttacggcgcattcatcggctgcgacaattatccc
gaatgcaccttccgccgcaaattcggccagcccggtgccgacgatggcagcgatgatggc
gtgatgggcgagcaccctgagaccggcgaaccgatcgagcgcaagtcgggccggttcggg
ccgtatgtccagatgggcgagggcaaggaagccaagcgggcttccatcccaaaggatctg
gatgatttcgaccttgattgggcggtgaaacttctcgacctgccgcgcattatcggcggc
catccggaaaccggcaaggagatcgaggcttcgatcggccgctacgggccataccttcgt
catgacggcaaatatgccaagctctccagcacgcgcgatgtgttcgagaccgggatgaat
gccgccgtcacgctgttggcggaagcggccagcaagggcggtcgcggtcgtggcagtcgc
gaaccgctgaaggtcctcggcaagaccgaagcgggcgatgaggtcaagttgatggacggg
cgttatggcccctacgtgaccgatggcaatgtcaacgcgaccatcccgaaggataaagac
aaggaccgcctcacgctggacgaagcgctggcgatgatcgcggaaaaggctgccaaagcc
ccggcgaaaaagaagcgcaaggctccggcgaggaagaaggcgccagccaagaaaaagcct
gcggccaagaaaaaggcagcagtgaaaagctga
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