Aurantiacibacter gangjinensis: BMF35_a2152
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Entry
BMF35_a2152 CDS
T04581
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
egn
Aurantiacibacter gangjinensis
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egn03016
]
BMF35_a2152
Enzymes [BR:
egn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BMF35_a2152
Transfer RNA biogenesis [BR:
egn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BMF35_a2152
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
APE28981
UniProt:
A0A0G9MQU6
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All DBs
Position
I:2214251..2215462
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AA seq
403 aa
AA seq
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MQIHPLITDTETLAALCERLARHDAVCVDTEFMRENTYYPLLCLIQIGNEEEAAAVDPLA
DGIDLSPLLELLTDNDEVLKVFHAGGQDVEIIYNLTGKTPFPIFDTQIAMMAISQSEQIG
YANLVESWLGKTIDKGARFTDWSRRPLTDRQIEYAIGDVTYLAQIFPKILKRLVKTDRGH
WLDAEMEKLADPANYANDLDMAWHRIRAPGRNPAVLGRLKALAAWRETEAQSKDIPRGRI
IRDETMADIASHPPKKQADLAKVRGLSNAWKENDIGKRLMRVVKNAEALPDEEMPTKPKR
GAPLGKEGALVADLLKLLLKIRAREIDVASRLLTKSDELEALAAGVRKLPILDGWRYEIF
GRDALDLVEGKLAFAVEKGRLKMTHIDDVTSGDATVHAEAEEA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccatcccctgattacagataccgaaacgctggccgccctgtgcgagcggctg
gcccggcacgatgccgtgtgcgtcgataccgaattcatgcgcgagaacacctattacccg
ctgctctgcctcattcagatcggaaacgaggaagaagcagctgcagtcgatccgctggcg
gacggcatcgacctgtcgccattgctggaactgctcaccgacaatgacgaggttctcaag
gtcttccatgccggcgggcaggatgtagagatcatctacaaccttaccggaaaaacgccc
ttccccatcttcgacacgcaaatcgcgatgatggcaatcagccagtccgaacagatcggc
tacgccaatctggtcgagagctggctgggcaagacgatcgacaagggcgcgcgcttcacc
gattggagccgccgcccgttgaccgatcggcagatcgaatatgccattggcgacgtcacc
taccttgcgcagatttttccgaaaatccttaagcggctggtgaagaccgatcgcggccac
tggctggatgcggaaatggagaagctggccgacccggccaattacgccaacgatcttgat
atggcatggcaccgtatccgcgcacccggtcgcaaccccgcagtgctgggccggctgaaa
gcgctggccgcatggcgagagaccgaggcgcagagcaaggacattccgcgcggtcgcatc
atccgcgacgagacgatggccgatattgccagccatccgccgaagaagcaggccgatctt
gcaaaggtgcgcggactttccaatgcatggaaagagaacgatatcggcaaacgcctgatg
cgcgtcgtcaagaatgcggaagccttgcccgacgaggaaatgccgaccaagcccaaacgc
ggtgcaccgctgggcaaggaaggcgcgctggtggcggaccttttgaagctcctcctgaaa
atccgcgcccgcgaaatcgacgtagccagtcgcctgctgaccaagtcagacgagctggaa
gcgctggctgccggtgttcgcaagctgccgatcctcgatggctggcggtatgagattttc
ggcagggacgcgctcgatctggtggaaggcaagctggctttcgccgttgaaaagggtcgg
ctgaaaatgacccacatcgacgatgtgacaagcggcgatgcgaccgtccatgccgaggcg
gaagaggcttga
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