Elizabethkingia ursingii: BBD34_00145
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Entry
BBD34_00145 CDS
T05036
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ego
Elizabethkingia ursingii
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ego03016
]
BBD34_00145
Enzymes [BR:
ego01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BBD34_00145
Transfer RNA biogenesis [BR:
ego03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BBD34_00145
Prokaryotic type
BBD34_00145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Lactamase_B_6
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AQX07154
UniProt:
A0AAJ3TRC6
LinkDB
All DBs
Position
31228..32142
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AA seq
304 aa
AA seq
DB search
MGAYLTILGYNSAIPTVKSSPTAQFLEMDERCFLIDCGEGTQVQLRKAKAKFSKINHIFI
SHLHGDHCFGLPGLIASFRLLGRDQELHVYGPKGIKKMLETIFEITETHRGFPIIYHELV
GDLSQKVYEDDKLEVWTIPLDHRIYCNGYLFREKPKDRRLNMVEISKYSEIEICDYHNLK
RGKDFVLSDGYILKNEVLTTDPEPPVSYAFCSDTRFKEDIIPIIENVDLLYHESTFLHDL
KEMADYTGHTTAKEAAIIAQRAGVKKLILGHFSNRYADLTVFTDEAREYFPNTFLPIALE
PVKV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgggggcatatctcactattttaggttataattcagcaataccaaccgttaaatcttca
cctacagcacaattcctggaaatggatgaacgctgttttcttatcgattgtggtgaagga
acacaggtacaactgagaaaagctaaagcaaagttttctaagatcaatcatattttcatc
tctcatcttcatggagatcattgtttcgggctgcccggacttatcgcgtcattccggctt
ttaggtagagaccaggaattacatgtctatggaccgaaaggaatcaagaagatgttggaa
acgatatttgaaattactgaaacacatcgcggttttccaattatttatcatgaactggta
ggagatctgtctcagaaagtttatgaagacgataaattggaagtatggactataccttta
gatcaccgaatttactgtaacggatatcttttcagagagaaaccaaaggacagacggttg
aatatggtagagatttccaaatattctgaaattgaaatatgtgattatcacaatctgaaa
cgtggtaaagactttgttttatctgatggatatattctgaaaaatgaagtattaactaca
gatccggaaccacctgtatcttatgcattctgttctgataccagattcaaagaagatatt
attccaataattgaaaatgtagatcttttatatcatgaatctactttcctgcatgatcta
aaagaaatggcagattatacaggacatactacggcgaaagaagctgcaataattgcacaa
agagctggtgttaagaaacttattctaggacatttttctaaccggtatgcagacctaacc
gtctttactgacgaagcccgtgaatattttccaaatacttttttaccaatagctttagag
cctgtaaaagtataa
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