Elizabethkingia ursingii: BBD34_00520
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Entry
BBD34_00520 CDS
T05036
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ego
Elizabethkingia ursingii
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ego03400
]
BBD34_00520
Enzymes [BR:
ego01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBD34_00520
DNA repair and recombination proteins [BR:
ego03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BBD34_00520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Ubiquitin_RHG40_C
Motif
Other DBs
NCBI-ProteinID:
AQX07225
UniProt:
A0AAJ3NGD0
LinkDB
All DBs
Position
113772..116507
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AA seq
911 aa
AA seq
DB search
MSETTQHSFLNKIVDSLLQQDKPLHAYTFILPGKRPAVFIKKILAEKQYGGILPKFQTID
ELITEISGLQQISGIPLWLFAYKTYRKIDAKEDIQSFLKWFPTLLKDWDDMLKFSKSDTP
VLEFMLSDERIKNWGELLGEDKPHRRNLNFWQKMNSFLPLLKKELLQENLATPGIIHEKV
KETVSHFAETTKLQLVFCGFNAFTPVEEKLVRNLLQWDKALCFFQADEYYIKDRRQEAGK
FLREHQHWKEFNEYRPFNWIENHFSENKNIQVFEVSGNIAQTKLLPHILDDLRKRNPELS
NTAVVLLDENLLPPTLESLQHLVKSLNITMGFPLKNLSFSVAMKKLFYLQKQLDKNSSSY
YYADLVPLLEELPYKKEDEPIIKGFLEQLEERNLVYISRKLFNELLGGISYINLLTKPND
PKVYLDTLIDFCISCKFEKINDIDYENISSFEKAFISLKNQLQQYDFLVDIITLEVLVNQ
LVSTETIDFEGEPLSGLQLMGLLETRLLNFENVIMLSINEGKLPLGRTQNTYLPFDVRRN
FGMNTFLENDSIYAYHFYRLIQEAENVYMLFNGLTSGVNIGEKSRFITQIEMESQHQIQN
YVVDSSSEPVNQEPIRIKKTPLVLEKLELWKQKVSPSHLNAYLYNPLDFYLNQILNTRLP
DELEEEISVRNFGNLVHYTLDYLYQSLLNRKLTTADLKQAQNKVEESLDYIIVEKLKHSP
DYYKRGMNYIHKSVAKRTLQNIIQKDLDDVEQGNSLEILALEHNIHADFYLDDQQQDKIS
FNGFADRIDRFNGALRIIDYKSAKAGDLNVKSNPKKDEDTQLFDKKYKQEVQLSIYAHCA
LTSGAFPDQEVQCGIWSFVAPDEGPKMLNISGDSYISKSDLELPMKSVKSIILDILNPEK
DFVEEDIAGWG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactacccaacatagttttctaaacaaaattgttgacagcctcctccaacag
gacaaacctctccatgcctatacctttatacttccgggtaaacgtccggcagtttttatc
aaaaagatcctggcagagaaacaatatggaggaatactgccgaaatttcagactattgac
gagctaattacagaaatatccggactacagcagatctcgggtattcctttatggcttttc
gcttataaaacctatcgtaaaatagatgcgaaagaggatatacagtctttcctgaaatgg
ttcccaacacttttaaaagattgggacgatatgctgaaattttctaaaagtgatactcct
gttctggaatttatgctttctgacgagcgtataaagaactggggagaattgcttggtgaa
gataagccacaccgacgcaacctgaacttctggcagaaaatgaattcttttcttccgcta
ctaaaaaaagaattgcttcaggaaaatctcgcaactcccggaattatccatgaaaaggta
aaagaaactgtaagccactttgctgaaactacaaaactacagttggtattctgtggtttt
aatgcctttacacctgtagaagaaaagctggtcagaaatctcttgcaatgggataaggca
ttatgttttttccaggcagacgaatattacatcaaagacagacgtcaggaagccggaaaa
tttctgcgcgaacatcagcattggaaggagtttaacgaatacagacctttcaactggata
gaaaatcacttttcggaaaacaaaaatattcaggtatttgaagtttccggaaatatcgca
caaacaaaacttcttccgcatattctggatgatcttcggaaacgaaatcctgaactaagc
aacacagcggttgtccttctggacgaaaatctgctgccaccaacattggaaagcctccag
catctggtgaagagcctgaacattacaatgggattcccgctgaagaatttatcattcagt
gtggccatgaaaaagcttttttatctgcagaaacaattggataaaaacagttcatcttac
tattatgcagaccttgttccgttgttagaggaattaccatacaagaaagaagatgagcct
attataaaaggctttctggagcaactggaagaaaggaatctggtttatatttccagaaaa
ctgtttaatgagcttttaggaggtatatcttatattaatttattgaccaaaccaaatgat
ccaaaagtttatctggatacacttatcgacttttgcatctcatgcaagtttgaaaagata
aacgatatagattatgaaaatatatcgagcttcgaaaaggcttttataagtcttaaaaac
cagttacaacaatatgacttccttgtagatatcattactctggaagtattggtaaaccaa
ctcgtaagtaccgaaaccatagattttgaaggggaacctctttcgggattacagcttatg
ggacttttggaaacccgtttgctaaattttgagaatgttattatgctttctataaatgaa
ggtaaactaccattgggaagaactcagaatacttacctgcctttcgatgtccgccgtaat
ttcggaatgaatacttttctggaaaacgattctatttatgcatatcatttttaccgactt
attcaggaagctgaaaatgtatacatgctcttcaatggactcacaagtggggtaaatatt
ggtgagaaaagccgtttcatcacccagatcgaaatggaaagtcaacaccagatacaaaat
tatgttgtagacagctcttctgaacctgtgaatcaggaaccgatacgcatcaagaaaaca
ccattggtattggaaaagctggaactttggaaacagaaagtttcaccttcacatctcaat
gcctatctctataatccattggatttctacctgaatcagattctgaacaccagacttccg
gatgaactggaagaagaaatctctgtccgtaactttggtaatcttgtgcattacacactg
gattatctttaccagagcttactgaacagaaaactgacaacagcagatcttaaacaggcg
cagaataaagtagaggagtcactggactatattatcgtagaaaaactaaaacattcccca
gattattataaacgcggaatgaattacattcataaatcggttgctaaaagaacacttcag
aatatcattcagaaagatctggacgatgttgagcaaggaaactcattggaaattctggcg
ctggagcataatattcatgctgatttttatctggatgaccagcagcaggataaaataagc
tttaatggttttgccgacagaatagaccgcttcaacggagcacttcgcattatcgactac
aaaagtgctaaagcgggtgacctgaatgtaaagtctaaccctaaaaaagatgaggacacg
cagttatttgataaaaagtacaaacaggaagtgcagctatctatctatgcacattgtgcc
ttgacttccggagcttttccggatcaggaagtacaatgtggtatatggagttttgtggca
cctgatgagggtcccaaaatgctaaatatatccggagacagctacattagtaaatctgac
ctcgaactaccaatgaaatcggtaaagtcaattatactggatatcctgaatccagagaag
gactttgttgaagaggacatcgcagggtggggctaa
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