Elizabethkingia ursingii: BBD34_02115
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Entry
BBD34_02115 CDS
T05036
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ego
Elizabethkingia ursingii
Pathway
ego00541
Biosynthesis of various nucleotide sugars
ego01100
Metabolic pathways
ego01250
Biosynthesis of nucleotide sugars
Module
ego_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BBD34_02115
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ego01005
]
BBD34_02115
Enzymes [BR:
ego01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
BBD34_02115
Lipopolysaccharide biosynthesis proteins [BR:
ego01005
]
Lipid A
BBD34_02115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
tRNA-synt_2c
Motif
Other DBs
NCBI-ProteinID:
AQX07511
UniProt:
A0AAJ3NF88
LinkDB
All DBs
Position
complement(471639..472448)
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AA seq
269 aa
AA seq
DB search
MIQALDKIKHKDSKNFFLIAGPCAIESEDLAMEVAERVVQLTNQFNIPYIFKGSFKKANR
SRVDSFTGIGDVKALEILKKVGEKYDIPTTTDIHENEHAALAAQYVDVLQIPAFLVRQTD
LLIAAAVTGKAVTLKKGQFLSAESMKFAVDKVKDSGNDKIALIERGNSFGYTDLVVDFRG
IPTMRQYAPTILDITHSLQQPNQSSGVTGGRPELIETIAKAGIAVGADGIFIETHPNPAV
AKSDGANMLKLDYLEALLEKLTRVREAIL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggcattagataagataaaacataaagattctaagaacttctttcttattgca
ggaccttgtgctattgaaagcgaagatctggctatggaagtagcagaaagagtagttcag
cttaccaatcagttcaatattccatatatcttcaaaggttcttttaaaaaagccaaccgt
tcacgtgttgacagttttacaggaataggagatgttaaagcgcttgaaattctgaaaaaa
gtaggggaaaagtacgatattcctacaacaactgatattcatgaaaatgaacatgcagca
ttagcagctcagtatgtagatgtattacagattcctgctttcttagtacgccagacagat
ttattgatagcagctgcagtaacaggaaaagctgtgacactgaagaaaggacaattcctt
tctgcggaatctatgaagtttgctgtggacaaagtaaaggattcaggaaatgataaaata
gcattgattgaaagaggaaactcttttggttataccgatttggttgtagacttccgcgga
attcctacaatgcgtcagtatgcgcctacaatattagatattacccactcattacagcag
cctaaccaaagctcaggtgttacgggaggaagacctgagttaattgaaactattgctaag
gctggtattgcagttggcgcagacggtatctttatcgaaacacatcctaaccctgctgtg
gcaaaatcagatggtgcaaacatgctgaaattagattatctggaagcattactggaaaaa
ctaacaagagtacgcgaagcaattttgtaa
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