Elizabethkingia ursingii: BBD34_02855
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Entry
BBD34_02855 CDS
T05036
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ego
Elizabethkingia ursingii
Pathway
ego03030
DNA replication
ego03430
Mismatch repair
ego03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ego00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBD34_02855
03430 Mismatch repair
BBD34_02855
03440 Homologous recombination
BBD34_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ego03032
]
BBD34_02855
03400 DNA repair and recombination proteins [BR:
ego03400
]
BBD34_02855
Enzymes [BR:
ego01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBD34_02855
DNA replication proteins [BR:
ego03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBD34_02855
DNA repair and recombination proteins [BR:
ego03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBD34_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Tnp_P_element_C
Motif
Other DBs
NCBI-ProteinID:
AQX07643
UniProt:
A0AAJ3TQC7
LinkDB
All DBs
Position
complement(634798..639459)
Genome browser
AA seq
1553 aa
AA seq
DB search
MFLIFDTETTGLPRNFNAPLTDFDNWPRMVQIAWQLHDEHGNLIENQDYIIKPEGYDIPF
NAYRIHGISTEMAMREGRDLKEVLNEFKEVLKKTKVVAGHNVTFDYSIVGSEFLRKELED
SLKDKPIVDTMEFGTNVCQLPGGRGGRFKSPKLEELSEKLFGHKFDEAHNAAADVNATAQ
AFFEMMRLEVYPLDRIFFDDVQMKAFKDHNPAVFKPFDIVIRRQVADSKKRKKTADFGDT
DDIDIGNFFHFYSHSIYSTLQATTGLADMVSIAEKNNFPAVGLVDLGNMMGAFKFIDEVE
KYNGNLKQKKQDAEAAEEKPDNYDEINSAKFLTPILGLELYISERYQQRQFTKDDPDRRT
QVVLLAKNFEGYKNLAKLSSIGFKEGYYAGVPRVSRALISQYKDNLIAMTGSLSCEVPST
ILELGEQRGEEAFKWWMNEFGDDFYVQIQNHQMDEEDYVNEILLKFADKHNVKILAQNET
YYSRKSDAKIQDIVACIKDGEKLSTPVGKGFGKRKGLNSEQFYLKNSEEIKQAFQMYPDA
FMAYDEFLNKFESYKLKRDVLLPKFDIPEEFQDVEDLADGGKRGEMNFLRHLTYEGARKK
YEEITDDIRERLDFELDIIAKTGYPGYFLIVQDFCNEAKNMGVSVGPGRGSAAGSAVAYC
IGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDRVIKWVIDKYGQNQVAQIITY
SVLGGKSAIKDAGRVLDVSIPETNNIAKLIPNTPGMNIAKVIKSDLKKFKPEDLPLVDEI
KGILNNPDDGRFNVLDSAYKMEGCIRNTGIHACGVIITPEDISNLVPVTIAAKDADILVS
QFDNSVAESAGLLKMDFLGLRTLTIIKDAVKLIKNRHGIEIIPDDIPLDDAKTYQLFKEG
RTIGIFQYESAGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGLEEIIYDL
PETQEYLQETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQKAVLDKMFPKFIEG
GKKNNLDEEKLHKIWKDWEAFAEYAFNKSHSTCYAYIAYHTAYLKANYPAEYMASVMSNN
INNTKQITLFMEDCQAMGVDVLGPSVNESEYEFAVNEKGQIRFGLGAIKGIGEGPSEAIC
KEREQGGRFTDIYSLFERIPSSQLNKRVVESLVFAGAFDELDSYHRAQYFDVDTAGRTNI
ERLLKYSNSFQDSKNSVENSLFADFADEVQIERPKINPAPEWQNMHKLNREKEAIGFYLS
AHPLDEFYYQYKFIQGALSKKSVVSKKLDEELEKAPENEKVEEQDDKDEVSTDIDFPADM
LEVDGDEIIEEVIKKVDPRGKFNFLNLDEVDPYRDFVLQRDFSNLTPAEVSKLKEKKFRS
KGNDNSKEYMVSGLITEYVIRDGYESGTKIAFITLEDYTGSYSFRLNDKDYMRLREKLGE
HRFVIFKIKFAPSKDFDRLYVNVTEVIDLKEAFDRYANQLSLVVPFNEVDQDDIEFFRRT
FAHNKGVHKLSFYLKDPVENHFVELNSMQTSVDISAETIKLLHEYKKYELFLN
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgatttttgatacagaaacaactggtttaccccgaaattttaatgctccttta
actgacttcgacaactggccgcgcatggttcagattgcatggcagttacacgacgagcat
ggaaatcttatagagaatcaggattatattataaagcccgagggctacgatattccgttt
aatgcataccgcatccacgggatatctacagagatggcgatgcgtgaaggtcgcgatctt
aaagaggtacttaatgagttcaaggaagtactgaaaaaaacgaaagtagtagcagggcac
aatgtaacctttgactacagtattgtaggatccgaatttcttagaaaggaactggaggat
agcctaaaagacaagcctattgtagatacgatggagtttggtaccaatgtatgtcagctt
cccggaggtagaggtggaaggtttaaatcccctaaactggaggaactctctgaaaaatta
ttcggacacaaattcgatgaagcccacaatgctgcagccgacgtaaatgctacagcacag
gcattcttcgaaatgatgagattggaagtttatccgttggatagaattttcttcgacgat
gtacagatgaaggcctttaaggatcataatcctgctgtcttcaagcctttcgatattgtt
atccgaagacaggttgctgattctaaaaaaaggaaaaagactgctgactttggcgatacc
gatgatattgatattgggaactttttccatttttatagccatagtatttattcgacttta
caggcgacgactggtttggcagatatggtttccatagccgaaaagaataattttccggct
gtaggactcgttgaccttggtaatatgatgggagccttcaagtttatcgatgaggttgaa
aagtataacggaaatcttaagcagaaaaagcaggatgccgaagctgctgaagaaaaaccg
gataactatgatgaaattaacagtgcaaagttccttacacctattttggggctagaactt
tatatttcggagcgttatcagcaaaggcagtttactaaagatgatccggacagaagaact
caggttgtattattggctaaaaactttgaaggatataaaaatctggcaaagctttcatct
ataggatttaaagaaggttattatgcaggggttccaagggttagccgtgcattaatatca
caatataaagataatcttattgcaatgacaggaagcttgtcctgcgaagttccttctacc
atcctggaattgggggagcagcgtggtgaagaagctttcaaatggtggatgaatgaattt
ggtgatgatttctatgtacagatacagaatcaccagatggatgaggaagactatgttaat
gagattttgttaaagtttgcggataaacacaatgtaaaaatactggcgcagaatgaaact
tattacagcaggaaatcggatgccaaaatccaggatattgtagcctgcattaaagatggt
gagaaactttcgacacctgtaggtaaaggttttgggaaaagaaaaggtctgaacagtgaa
cagttttatctgaaaaatagtgaagagataaagcaggctttccagatgtatccggatgct
tttatggcgtatgatgaatttctgaataagtttgagtcttataaactgaaaagagatgtt
ctcttacctaaatttgatatccctgaggaatttcaggatgttgaagacctggctgacggc
ggtaaaagaggggagatgaacttcctgagacatcttacttatgaaggagctcggaaaaaa
tatgaagagattaccgatgatataagggaaagactggacttcgagttggatattattgct
aaaacagggtatccgggatatttccttattgtacaggatttctgtaacgaagctaaaaat
atgggggtatcggttggcccgggacggggatctgcagcaggatctgctgtagcttactgt
atcggaattaccaatgtagaccctattaaatatgatctcctttttgagcgttttcttaac
ccggaaaggatttcgatgcccgatattgatatcgactttgatgatgagggtcgtgacagg
gttattaaatgggtaatcgataaatacggacaaaaccaggtagcacagattattacctac
tcagtactgggtggtaaatcagctattaaagatgcaggaagggtactggatgtgtctatt
cctgaaaccaataatattgcaaagctaattccgaatacaccggggatgaatattgcgaaa
gtgataaagtccgatttaaagaaattcaagccggaagatcttccgctggtagatgaaata
aaaggaattctgaacaatccggacgatggtcgtttcaatgtactggacagtgcttacaag
atggaaggctgtatccgaaataccggtattcacgcttgtggagtaattattacgccggaa
gatatcagtaatctggttccggtgactattgcagcaaaagatgcggatattttggtatct
cagtttgataactcggtagctgaaagtgcaggattgctgaaaatggacttcctgggactt
aggactcttaccattattaaagacgctgttaagctcattaaaaacagacacggaatagaa
attattccggatgatataccactggatgatgccaaaacttatcagctctttaaagaaggt
cgtacgattggtattttccagtatgaatctgctggtatgcaaaaatacatgcgtgagctg
aagcctacggtatttgccgatcttattgccatgaatgcattgtaccgaccgggacctatt
aagtatataccgaactttatcaaccggaagcatggtctcgaggagattatctatgacctg
ccggaaacacaggaatacttacaggagacctatggaattacagtatatcaggagcaggta
atgctactttctcagaagctggcgaactttaccaaaggtgaagccgatacgctgagaaaa
gcaatgggtaaaaagcaaaaagcggtactggataagatgttccctaaatttattgaaggc
gggaagaaaaataatctggacgaagagaaacttcataaaatctggaaagactgggaagcc
tttgcagaatatgcatttaacaagtctcactctacatgttatgcttatatagcttatcac
actgcttatctgaaagccaattatccggcggagtatatggcgagtgtaatgagtaataac
attaacaacaccaagcagattaccctattcatggaggactgtcaggcaatgggcgtagat
gtattggggccatctgttaatgaatctgaatatgaatttgcagtaaacgagaaaggtcag
atccgttttggacttggtgctattaaagggattggagaagggccttcggaagctatttgt
aaggaaagagaacaaggtggaagatttaccgatatctatagtctttttgaaagaattcct
tcgtcacaactaaataaaagagtagtggaaagtttggtgtttgccggagctttcgacgaa
ttagattcttatcaccgtgctcagtatttcgatgtagatactgcaggaagaaccaatatt
gaacgtttactaaaatacagcaacagttttcaggatagtaaaaactctgtagaaaactct
ttatttgctgatttcgcagatgaggttcagatagaaaggccaaaaataaatccggctccg
gaatggcagaatatgcataaactgaaccgggaaaaagaagccataggtttctatctttcg
gcacacccactggatgaattctattatcagtataagtttattcagggagcactgagcaaa
aaatcggtggtcagcaaaaaactggatgaagaactggaaaaagctcctgaaaatgagaaa
gtagaagagcaggatgataaggatgaagtatctacggatatagatttccctgctgatatg
ctggaggtagacggtgatgaaattattgaagaggttattaaaaaagttgacccgagaggg
aaatttaatttcctgaatcttgatgaggtagatccttacagagattttgtgcttcaaaga
gatttttctaatctgacaccagcagaagtctcaaagttaaaagagaaaaaattccggagt
aaaggaaatgataattccaaagaatatatggtttccggtcttatcacggagtatgtgata
agagatggttacgaaagcggtactaagatcgcctttattacattggaagattacacaggc
tcatattctttcaggctgaatgataaagactatatgcgcctgagagaaaaacttggagag
cacagatttgtgatttttaaaatcaagtttgccccttccaaagactttgacagactgtat
gtaaatgttacagaggttattgacctgaaagaagcttttgatcgctatgctaatcagctt
tctttagtagtgccatttaatgaagtggatcaggatgatatagaatttttcagacgtact
tttgcccataataaaggggtacataagctaagtttctatctgaaagatccggttgaaaac
cattttgtagaactaaactcaatgcagacttcagtagatataagtgctgagacaataaag
cttctgcacgagtataagaaatatgaattattcttgaattaa
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